| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2229 |
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| Symbol | rpsA |
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| ID | 5421088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2489003 |
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| End bp | 2490718 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640881482 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001417130 |
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| Protein GI | 154246172 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.516713 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0580456 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCCG TAGAAACCAC CCGTGACGAT TTCGCCGCCC TGCTCGACGA GAGCTTCGGT
CGCGCCGACA TGCAGGAAGG TGCCGTCGTC AAGGGCATCG TGGTCGCCAT CGAGAAGGAT
CTGGCGATCA TCGACATCGG TCTGAAGACC GAAGGCCGCG TGGCGCTGCG CGAATTCGCC
GGCCCCGGCC GCGAGAACCC CATCCAGGTG GGCGACGAGG TCGAGGTCTA TCTCGAGCGC
GTCGAGAACG CCATGGGCGA AGCCGTCCTC TCGCGCGACA AGGCGCGCCG TGAGGAAAGC
TGGATCAAGC TCGAGAAGGC GTTCACCGCC AACGAGAAGG TCTTCGGCGT GATCTTCAAC
CAGGTGAAGG GCGGCTTCAC CGTCGATCTC GACGGCGCCG TGGCCTTCCT GCCGCGCTCC
CAGGTGGACA TCCGCCCGAT CCGCGACGTC GGCCCGCTGA TGCACAACCA GCAGCCGTTC
CAGATCCTCA AGATGGACCG CCGCCGCGGC AACATCGTGG TCTCCCGCCG CACCGTGCTG
GAAGAGACCC GCGCCGAGCA GCGCCACGAG CTGGTCCAGA ACCTCGAGGA AGGCCAGGCC
ATCGACGGCG TGGTGAAGAA CATCACCGAC TACGGTGCGT TCGTTGACCT CGGCGGCATC
GACGGCCTGC TGCACGTCAC CGACATCGCC TGGCGCCGCG TGAACCACCC GACCGAGGTG
CTCAACATCG GCCAGACGGT CAAGGTCAAG ATCATCAAGA TCAACCACGA GACTCACCGC
ATCTCGCTCG GCATGAAGCA GCTTCTGGGC GATCCCTGGG AGGGCATCGA GGCCAAGTAT
CCGGTGGAGG CCCGCTTCAA GGGTCGCGTC ACCAACATCA CCGACTACGG CGCGTTCGTG
GAACTGGAGC CGGGCATCGA AGGCCTGATC CACGTCTCCG AAATGTCGTG GACCAAGAAG
AACGTCCACC CCGGCAAGAT CGTCTCCACC TCCCAGGAGG TCGAGGTCCA GGTGCTGGAA
GTGGACAGCG CCAAGCGCCG CATCTCGCTC GGTCTCAAGC AGACCCTCCA GAACCCCTGG
GAGGCCTTCG CCGAGAAGTA TGCCCCCGGT GCGGTGGTGG AAGGCGAGGT CAAGAACAAG
ACCGAGTTCG GCCTGTTCCT CGGCCTCGAC GGCGACGTGG ACGGCATGGT CCACCTCTCC
GACCTCGACT GGAACCGTCC GGGCGAGCAG GTGATCGACG AATACCGCAA GGGCGACATG
GTCAAGGCTG TGGTGCTCGA CGTGGACGTC GAGAAGGAGC GCATCTCCCT CGGCATCAAG
CAGCTTGCCG GCGATCCCTT CGCCGAGGCT GGCGAGGTGA AGAAGGGTGC CATCGTCACC
TGCGAAGTCA CCGACGTGAA GGACGGCGGC ATCGAGGTGA AGCTCACCGG CACCGACCTG
TCCGCCTTCA TCAAGCGGTC GGAGCTCGCC CGCGAGCGCA ACGACCAGCG CCCCGAGCGC
TTCTCGGTCG GCGACAAGCT GGACGCCCGC GTCACCCTGT TCGACCGCAA GGCGCGCAAG
GTGCAGGTCT CCGTCAAGGC GCTCGAGATC GCCGAGGAGA AGGAGGCCGT GGCCACCTAC
GGCTCGCAGG ACTCCGGCGC CTCGCTCGGC GACATCCTCG GTGCCGCGCT CAAGCAGCGT
GCCGCCGGCG GCGAGACCGA AGAGAAGGAA GACTGA
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| Protein sequence | MSAVETTRDD FAALLDESFG RADMQEGAVV KGIVVAIEKD LAIIDIGLKT EGRVALREFA
GPGRENPIQV GDEVEVYLER VENAMGEAVL SRDKARREES WIKLEKAFTA NEKVFGVIFN
QVKGGFTVDL DGAVAFLPRS QVDIRPIRDV GPLMHNQQPF QILKMDRRRG NIVVSRRTVL
EETRAEQRHE LVQNLEEGQA IDGVVKNITD YGAFVDLGGI DGLLHVTDIA WRRVNHPTEV
LNIGQTVKVK IIKINHETHR ISLGMKQLLG DPWEGIEAKY PVEARFKGRV TNITDYGAFV
ELEPGIEGLI HVSEMSWTKK NVHPGKIVST SQEVEVQVLE VDSAKRRISL GLKQTLQNPW
EAFAEKYAPG AVVEGEVKNK TEFGLFLGLD GDVDGMVHLS DLDWNRPGEQ VIDEYRKGDM
VKAVVLDVDV EKERISLGIK QLAGDPFAEA GEVKKGAIVT CEVTDVKDGG IEVKLTGTDL
SAFIKRSELA RERNDQRPER FSVGDKLDAR VTLFDRKARK VQVSVKALEI AEEKEAVATY
GSQDSGASLG DILGAALKQR AAGGETEEKE D
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