| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_2160 |
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| Symbol | |
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| ID | 5424413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2421545 |
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| End bp | 2422276 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640881412 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001417061 |
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| Protein GI | 154246103 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.251589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.196437 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCTCC CCATCGCCGA CGCCAACCCG CTGGAGCATG TGCGGCACGC CTACGTCACC
TGGGCGCTGC TGGCGCTCAA CCTGTTCGTG TTCCTGGCGC TCCAGCACGG CGCCTTCGGC
GCGGTGAGCG AGGCCGGCAC CCTCGCCTTC GGCACCATTC CGGCGGTGGT GACGGGCGAG
GCGGTGCTGC CGGAAGGCTA TGCGCGCATT CCCGCGCCCT TCAGCCTCGT CACCTACATG
TTCCTGCACG GCGGCTGGCT GCACCTCATC GGCAACATGA CGTTCCTGTT CGTGTTCGGC
GACAATGTGG AAGACGCGCT TGGCCACGTC CGCTTCCTCG CCTTCTACCT GTTGTGCGGC
GCCCTGGCGG CGAGCGCCCA CGTGCTGGCG AACCCCGCCT CGGAAGCGCC TCTGGTGGGA
GCGTCGGGCG CGGTGGCAGG GGTGATCGCC GCCTATCTGG TGCTGCACCC CAATATCCGC
CTGTGGGCGC TGGTGCTCAT GAAGATCCCG CTGCGCGTGC CGGCCTATTG GGCCATCGGC
GCGTGGTTCA CCCTCCAGAT CTGGCAGATC CTGGTGAGCC AAGACCAGGA CACCGCATGG
TGGGCCCATG TGGGCGGCTT CGTTGCCGGA GCGCTGCTGG TGACCGTGAT GCGCCGGCCG
GGGGTGGCGC TGCTGGATAC CGACCCCTCC GGAGTGCCGA GCCGGCAGGC GCCGCGCAAG
AACGAGCCGT AG
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| Protein sequence | MFLPIADANP LEHVRHAYVT WALLALNLFV FLALQHGAFG AVSEAGTLAF GTIPAVVTGE
AVLPEGYARI PAPFSLVTYM FLHGGWLHLI GNMTFLFVFG DNVEDALGHV RFLAFYLLCG
ALAASAHVLA NPASEAPLVG ASGAVAGVIA AYLVLHPNIR LWALVLMKIP LRVPAYWAIG
AWFTLQIWQI LVSQDQDTAW WAHVGGFVAG ALLVTVMRRP GVALLDTDPS GVPSRQAPRK
NEP
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