| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1968 |
|---|
| Symbol | |
|---|
| ID | 5424444 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 2224962 |
|---|
| End bp | 2225648 |
|---|
| Gene Length | 687 bp |
|---|
| Protein Length | 228 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640881220 |
|---|
| Product | OmpW family protein |
|---|
| Protein accession | YP_001416869 |
|---|
| Protein GI | 154245911 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3047] Outer membrane protein W |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.135565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGT TCGGTCTGGG TGCCATTGTT GCGGCGGGCT TCGCCGCCTT TTCGATGGGC
GGTGCGGTGG CGGCAGACCT GTCGACCCCG GTCTACAAGG CTCCGGTGGT CGAGGAGGCC
CTGAGCCCCT GGCAGATCCG CGTTCGCGCA CTGTACGTGA TGCCGGAGAA CGGCGGGTCC
GTGAACGGCG TCCTCGGCTC CGACCTCACC TATTCCGACT CGGTGGTGCC GGAACTCGAC
ATCACCTACT ACTTCACCAA GAACATCGCG GCCGAACTCA TCCTCGGCGT CACCCCCCAC
GACATCAACG GCGCGGGCAC CATCACCAGC CTCGGCCAGG TGGGCAAGGT GTGGCTGCTG
CCCCCGACCC TCACCCTGCA GTACCACTTC ACCGATTTCG GGCCGTTCAA GCCCTATATC
GGCGCTGGTG TGAACTACAC CGTGTTTTTC AATCAGGACG CCAAGAACCC GGCGTTCGCC
AGCGTCGACG TGCACGACAC CTGGGGCCTC GCACTGCAGG CCGGCTTCGA CTGGATGATC
GACCGTCACT GGGGCATCAA CGTGGACGTG AAGAAGCTCT TCCTGGAGCC CTCCTTCACC
CTGCAGACCG TCGGTGGCAG CTACCTCACC GGCGGCGCCG ACCTGAACCC CTGGATCTTC
GGTACGGGCG TCACCTACCG TTTCTGA
|
|---|
| Protein sequence | MKKFGLGAIV AAGFAAFSMG GAVAADLSTP VYKAPVVEEA LSPWQIRVRA LYVMPENGGS
VNGVLGSDLT YSDSVVPELD ITYYFTKNIA AELILGVTPH DINGAGTITS LGQVGKVWLL
PPTLTLQYHF TDFGPFKPYI GAGVNYTVFF NQDAKNPAFA SVDVHDTWGL ALQAGFDWMI
DRHWGINVDV KKLFLEPSFT LQTVGGSYLT GGADLNPWIF GTGVTYRF
|
|---|
| |