| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1921 |
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| Symbol | |
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| ID | 5425458 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2172623 |
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| End bp | 2174473 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640881174 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_001416823 |
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| Protein GI | 154245865 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.010841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.727979 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGACA ACCGCAACAT GTTCATCGCC ATCGGCTTGT CGCTGGCGAT CCTCATTGGC
TGGCAGTTCT TCTTCGGCAT TCCACAGGCC GAGCGCCAGC GCCAGGCCGC CGAGCAGCAG
CGCATCGCCC AGCAGGCGCA GCAGCCGGCG CCCGGCGCCA CCCCCGGCGC CACCCCTGGC
ACGACAGCCG GCGCAGCACC GGGAGCCACG CCCGGCTCGG CCGGCGTGCC GCAGGCGGGC
AGCCCGGTCC CGGCGCGGCC CCTGACCCGC GAGGAAGCCC TCGCCCTGAC CCCCCGCGCC
GCCATCGAGA CCCAGCGCCT GAAGGGCTCC ATCGCGCTCA AGGGCGGTCG CGTGGACGAC
CTGCTGCTCA CCGAGTACCA CGAGACGGTG GACCCCAAGA GCCCGAACAT CGTGCTCCTG
TCCCCCTCCG GCGCGCCCAA TCCCTTCTAT GCGGAATTCG GCTGGACCGC GGCCGCCGGC
ACCGGCGTCA AGGTGCCCGG CCCCGACACC GTGTGGACCA CCAGCGGCAC CCTGACCGAG
AAGACCCCGC TGACACTCAG CTGGGACAAC GGCGCGGGCC TGATCTTCCA CCGCACCTAC
ACCATCGACG ACCATTACAT GTTCGCGGTG AAGGACGAGG TGGAGAACAA GACCGGCGCG
GCGGTGACGC TCTATCCCTA CGCCCTCGTC TCCCGCCATG GCATCCCGCA CGTGGCCGGC
TTCTACATCC TGCACGAAGG CCTCATCGGC GTGCTGGGTG ACAGCGGCCT GCAGGAGATC
ACCTACGCCA AGATGGACAA GGAGAAGCCC CACACCTTCG CCGCCACCGG CGGCTGGCTG
GGCATCACCG ACAAATACTG GGCGGCCACC GTCATCCCCG ACCAGAGCGT GAAGGTGGAC
GCCAAGTTCT CCACCTCCAC CTTCGCCGGC ACCCAGACCT TCCAGGCCGA TTATCTGGCC
GCCCCGCTCA CCGTGGAGCC CGGCGCCACC GTCGCCGCCA AGGGCCAGTT GTTCGCCGGC
GCCAAGGTGG TGCAGGTGGT AGACGGCTAC AAGACGAAGT ACGGCATCGA CCGCTTCGAC
CTGCTCATCG ACTGGGGCTG GTTCTACTTC ATCACCAAGC CGCTGTTCCT CGCCATCGAC
TGGCTCTATC GCCTGGTGGG CAATTTCGGC GTCGCCATCC TGATCATCAC GGTGGCGCTG
AAGGGCCTGT TCTTCCCGCT CGCTAACAAG TCCTACGCCT CCATGGCGAA GATGAAGGCG
GTGCAGCCGG AAGTGACCGC CATCCGCGAG CGCTACGCCG ACGACAAGGT GAAGCAGCAG
CAGGCGCTGA TGGAGCTGTA CAAGAAAGAG AAGATCAATC CGGTGGCGGG CTGCCTGCCC
ATCGTGATCC AGATCCCGGT CTTCTTCGCC CTGTACAAGG TGCTGTTCGT GACCATCGAG
ATGCGGCACG CGCCCTTCTT CGGCTGGATC CGCGACCTCT CGGCGCCCGA CCCCACCACC
ATTTTCAACC TGTTCGGGCT CATCCCGTGG GATCCGTCCT CGGTCCCGGT GCTTGGTGGC
TACCTGATGC TGGGCGCCTG GCCCATCATC ATGGGCATCA CCATGTGGGT GCAGATGAAG
CTGAACCCGG CCCCGCCGGA CCCCACCCAG CAGATGATCT TCAACTGGAT GCCCATCATC
TTCACCTTCA TGCTGGCCCA TTTCGCCGCA GGCCTGGTGA TCTACTGGGC GTGGAACAAC
ACGCTCTCGG TCAGCCAGCA GGCCATGATC ATGAAGCGCA ACGGCGTGAA GATCGAACTG
TGGGACAACA TCAAGTCGGC CTTCAAGAAG AAGCAGCCGG CCAAGGGATA G
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| Protein sequence | MSDNRNMFIA IGLSLAILIG WQFFFGIPQA ERQRQAAEQQ RIAQQAQQPA PGATPGATPG
TTAGAAPGAT PGSAGVPQAG SPVPARPLTR EEALALTPRA AIETQRLKGS IALKGGRVDD
LLLTEYHETV DPKSPNIVLL SPSGAPNPFY AEFGWTAAAG TGVKVPGPDT VWTTSGTLTE
KTPLTLSWDN GAGLIFHRTY TIDDHYMFAV KDEVENKTGA AVTLYPYALV SRHGIPHVAG
FYILHEGLIG VLGDSGLQEI TYAKMDKEKP HTFAATGGWL GITDKYWAAT VIPDQSVKVD
AKFSTSTFAG TQTFQADYLA APLTVEPGAT VAAKGQLFAG AKVVQVVDGY KTKYGIDRFD
LLIDWGWFYF ITKPLFLAID WLYRLVGNFG VAILIITVAL KGLFFPLANK SYASMAKMKA
VQPEVTAIRE RYADDKVKQQ QALMELYKKE KINPVAGCLP IVIQIPVFFA LYKVLFVTIE
MRHAPFFGWI RDLSAPDPTT IFNLFGLIPW DPSSVPVLGG YLMLGAWPII MGITMWVQMK
LNPAPPDPTQ QMIFNWMPII FTFMLAHFAA GLVIYWAWNN TLSVSQQAMI MKRNGVKIEL
WDNIKSAFKK KQPAKG
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