| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1883 |
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| Symbol | |
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| ID | 5423981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2123310 |
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| End bp | 2124104 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640881131 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001416785 |
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| Protein GI | 154245827 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.135329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCCTT CCGCGCCCAC GGCATCACCC CGTCCGCCTG AGCCCGCCCC CGACCTGCCG
GTGCTTTACC GCGACGGCAT GATGTTGATC ATCGACAAGC CCCACGGCCT GCCGGTCCAT
GCCGGCCCCA AGGGCGGGGA GACGCTGGCC GACCATCTCG ACGCCCTGCG CTTCGGCCTG
CCCCGCGCGC CGGAGCTGGC CCACCGGCTC GACAAGGACA CCTCCGGCTG CCTGGTGCTG
GGACGCCACG CCAAGGCTCT GGCATTGCTG GGGAAGCTGT TTGCCAACGG GAGCGTGGGC
AAGACCTATT TGGCGGTGAC CCAGGGTTCG CCGGCGGAGG ATGCCGGCCG CATCGACCAG
CCTCTGGCCA AGCGCTCGCC CCATCGCGGC TGGTGGATGC AGGCGGTGCC CAAGGGCACA
CCCGGCGCGC AGGAGGCGAT CACCGACTAC CGCGTGCTCC ACCGCGCCGG CGGCTTCGCC
GTGATGGCCC TCAGCCCGGT CACCGGCCGC ACCCACCAGC TGCGGGCGCA TCTGTCCAAC
CTCGGCCACC CCATCTTCGG CGATGCCATC TATGGCGGCG CCTCCCGCCT GCCGGGCGGG
CCGACGCTGC ACCTGCATTC CCGCCGTATC GTGGTGCCGC TTAAGGCCAA CGGCCCGGCG
GTTGCGGCCA GCGCCCCTTT GCCGCCGCAT ATCTGCGAGA CGCTTTCGTC GCTGGGCCTT
TCACCGGACG AGATCGGCCG CGCGGCGGAT GCGGTGGAAT GGGACGCCAA AATACCTGGC
GCGAAGCGTC CATAG
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| Protein sequence | MTPSAPTASP RPPEPAPDLP VLYRDGMMLI IDKPHGLPVH AGPKGGETLA DHLDALRFGL
PRAPELAHRL DKDTSGCLVL GRHAKALALL GKLFANGSVG KTYLAVTQGS PAEDAGRIDQ
PLAKRSPHRG WWMQAVPKGT PGAQEAITDY RVLHRAGGFA VMALSPVTGR THQLRAHLSN
LGHPIFGDAI YGGASRLPGG PTLHLHSRRI VVPLKANGPA VAASAPLPPH ICETLSSLGL
SPDEIGRAAD AVEWDAKIPG AKRP
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