| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1845 |
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| Symbol | murD |
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| ID | 5423393 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 2075594 |
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| End bp | 2077207 |
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| Gene Length | 1614 bp |
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| Protein Length | 537 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 640881093 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001416747 |
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| Protein GI | 154245789 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.186295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACGAC CATTGCCGCA CCGGAATTTT CGCAAAGCCA TGATCCCCGT CACCGTCTTC
AAGGACCGGA CCGTCGCCCT TTTCGGGCTC GGCGGCTCCG GGCTCGCCAC CGCCGAAGCG
CTCAAGGCCG GCGGCGCCCA TGTGATCGCC TATGACGATG CCGAGGCCTC CCGCCGCAAG
GCCGGCGAGG CCGGCATCCT GGTCCAGGAC TTAAGGTCCA TCGACTGGAC CATCGTGGCC
GCGCTCGTGC TCTCCCCCGG AGTGCCGCTC ACCCATCCCG AGCCGCACTG GTCGGTGAAG
CTGGCGCGCG ACGCCGGCGC GGAGGTGATC GGCGACATCG AGCTGTTCTG CCGGGAACGG
CACGCCATCG CCCGGCGCTC GCCGTTCATC GCCATCACCG GCACCAACGG CAAGTCCACC
ACCACGGCGC TCATCACCCA CATCCTGCGG GTGGCCGGAC GCGACGTGCA GATGGGCGGC
AATATCGGCA CCGCCATCCT CTCCCTCGCC CCGCCCAAGC CGGGCCGGGT TCATGTGGTG
GAGTGCTCGT CCTACCAGGT GGACCTCGCC CCGAGCCTCG ACCCCTCCGT GGGCGTGATG
CTGAACATCA CCCCCGACCA TCTCGACCGC CACGGCACCA TCGAGCATTA CGCGGCGGTC
AAGGAGCGGC TCGTCGCCGG CGTCGAGGGC GGCGGCACCG CCGTGGTGGG CGTGGACGAC
GATTTCTCCG CCGCCATGGC GGACCGGGCC GTCGAGGCGG GCAAGCATGT GGTGCGCATC
TCGGTGAAGC GCGCGCTGCC GGACGGCATC TGGCTCGACG GCGAGACGCT GGTGGTGTCC
GAGGGCGGGG CCGAGCGCTT CCGCCTGCCG CTCGCCGGCA TCGGCTCCCT GCGCGGCACC
CACAATGCGC AGAACGCCGC CGCCGCCTTT GCCGCCTGCC GCGGCGTGGG GGTCGCGCCC
GAGATCATCA CCATCGCCAT GAAGCGCTTC CCCGGCCTTG CCCACCGCAT GGAAGAGGTG
GGCAACAAGG GCGCGGTGCT GTTCGTCAAC GATTCCAAGG CCACCAACGC GGACGCCGCC
GAGCGGGCGC TGGCGAGCTT CACCAGCATC TTCTGGATCG CCGGCGGCAA GCCCAAGACC
GGCGGCATCG CCCCGCTCGC GCCGTTCTTC GATCGCGTGG CGAAGGCCTA CCTCATCGGC
GAGGCGGCTG AAGAGTTCGC CACGACCCTG GGCAGCACCG TCGCCCACGA GATCGCCGGC
ACCCTCGACA AGGCGGTGGC CGCCGCCGCG CGGGATGCCG AGGCCTCCGG GCTGAAGGAT
CCGGTGGTGC TGCTGTCGCC AGCCTGCGCC AGCTTCGATC AGTTCCCCAA TTTCGAGGTG
CGGGGCGACG CCTTCCGCGA ACTGGTGAAA CAGGTGCCGG GGGTGGAGGC ACGCACCCGC
TCCACCACGC CGGCAGCCCA GAAGGAGCAG CCGAAGGGGG GGCATCCGGG GGGACACCCC
GGCGGGCATC CGGGCGGCGC GCCCCACGGC ATGGGTGGCG GACACGGCGG CGGCCGTCCC
CACGGCATGG GCAATCCCCA TGGCGGCGGC CATCCCGGCA AGGGGCATCC CTGA
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| Protein sequence | MRRPLPHRNF RKAMIPVTVF KDRTVALFGL GGSGLATAEA LKAGGAHVIA YDDAEASRRK
AGEAGILVQD LRSIDWTIVA ALVLSPGVPL THPEPHWSVK LARDAGAEVI GDIELFCRER
HAIARRSPFI AITGTNGKST TTALITHILR VAGRDVQMGG NIGTAILSLA PPKPGRVHVV
ECSSYQVDLA PSLDPSVGVM LNITPDHLDR HGTIEHYAAV KERLVAGVEG GGTAVVGVDD
DFSAAMADRA VEAGKHVVRI SVKRALPDGI WLDGETLVVS EGGAERFRLP LAGIGSLRGT
HNAQNAAAAF AACRGVGVAP EIITIAMKRF PGLAHRMEEV GNKGAVLFVN DSKATNADAA
ERALASFTSI FWIAGGKPKT GGIAPLAPFF DRVAKAYLIG EAAEEFATTL GSTVAHEIAG
TLDKAVAAAA RDAEASGLKD PVVLLSPACA SFDQFPNFEV RGDAFRELVK QVPGVEARTR
STTPAAQKEQ PKGGHPGGHP GGHPGGAPHG MGGGHGGGRP HGMGNPHGGG HPGKGHP
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