| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1829 |
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| Symbol | |
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| ID | 5421342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 2055882 |
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| End bp | 2056730 |
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| Gene Length | 849 bp |
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| Protein Length | 282 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640881077 |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_001416731 |
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| Protein GI | 154245773 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.037769 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGTGC GGGTGTGCAT CACCGGCTCG CCGGTCAGCT ATTCACGGTC GCCGCTGCTT
CATGGCTATT GGCTGAAGGC CTACGGTATC GACGGAGATT ACGGCCGCGA GGAAGTGCCC
CCCGCGCAGG CGGCGGACTT CTACCGCAGC CTCGCGGCGC GCGGCTATGC CGGCTGCAAT
GTCACCGCCC CCAACAAGGA AATCGCCTTC TCGGTTCTGG ACGAGGCGGA TGAGAGCGCG
GCGGCGCTGG GCTCCGCCAA CACCCTGTGG CTGGAGGACG GCCGGCTGTG CGGCGCCAGC
ACCGACGGTT ACGGCTTCAT CGCCAATCTG GATGCGACAG TGCCGGGCTG GGATGGGGCG
CGCAAGCTGG CGCTGGTGCT GGGCGCGGGC GGTGCCTCGC GGGCCATCGT GCATGCAATG
GTTGAGCGCG GGTTCGAGCG GATCGTGCTG GCCAATCGAA CGCTGGAGCG GGCCGAGGCC
ATTGCGGTGG CGTTCGGCAA AACGGTCGTT CCGCTGGCCT TCGACAAGGC GGGCGAGGTG
ATGGCGGATG CCGACATCCT GGTGAATTGC ACCTCGCTTG GCATGAAGGG CGCAGCCGCG
CTCACCGTGG ACCTGTCGCG CCTCCGACCC GAGGCGGTGG TGAGCGATAT CGTCTATGTG
CCGCTCCTCA CTCCCTTGTT GACCGAGGCG GCGGCGCGCG GACTGCGTAC TGTGGACGGC
CTCGGCATGC TGCTGCATCA GGGGGTGCCC GGCTTCGAGC GCTGGTTCGG GGTGCGGCCG
GAGGTGACCC CCGAATTGCG CGAGCTGTTG ATCGCGGATC TTCGGGCCAA GGGCCAGCTG
GCGGCCTGA
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| Protein sequence | MTVRVCITGS PVSYSRSPLL HGYWLKAYGI DGDYGREEVP PAQAADFYRS LAARGYAGCN
VTAPNKEIAF SVLDEADESA AALGSANTLW LEDGRLCGAS TDGYGFIANL DATVPGWDGA
RKLALVLGAG GASRAIVHAM VERGFERIVL ANRTLERAEA IAVAFGKTVV PLAFDKAGEV
MADADILVNC TSLGMKGAAA LTVDLSRLRP EAVVSDIVYV PLLTPLLTEA AARGLRTVDG
LGMLLHQGVP GFERWFGVRP EVTPELRELL IADLRAKGQL AA
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