Gene Xaut_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1710 
Symbol 
ID5421445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1926045 
End bp1926761 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID640880956 
ProductABC transporter related 
Protein accessionYP_001416612 
Protein GI154245654 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0318533 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTCCC CCGCGCTTAA GGTCAAAGGC CTGCATTCAG GTTATGGCGA CATCCGGGTG 
CTGCGCGGCG TGGACATCGA GCTGCCACCG GGCGCCGTGG TGGCGCTCAT CGGCGCCAAC
GGGGCCGGCA AGACCACCCT GCTGCGAACC ATCTCCGGCC TCGTGCCGGC GTCCGCGGGC
AGCGTGGAGA TCGGCGGCAC GCCCATCACC GCTTTGCCCT CGCACCGGGT GGTGGAGGCC
GGCTTCGTGC AGTCGCCGGA AGGCAAGCAG CTGTTCTCCG GCATGAGCGT GATGGAGAAC
CTCATGGTCG GCGCCCACGG ACGCCGGGCC CATGCGCGGC GCCACGAGAC GCTGGAGGAG
GTGTTCGACC TCTTCCCCAT CCTCAAGGAG CGGCGCAGCC AGATCGCCTC CACATTGTCG
GGCGGCCAGC AGCAGATGGT GGCGGTGGGC CGCGCGCTCA TGGCCCTGCC GAGGGTGCTG
GCGCTGGATG AGCCGTCGCT GGGCCTTGCG CCGATCATGG TGGATCGCCT GTTCGAGAGC
ATCGCCCGCA TCAAGGCGCG CGACCTCTCC ATCCTCATCA TCGAGCAGAA CGTGTTCCAG
GTGCTGGAGA TGGCCGACTA CGGCTATGTG CTTGAAAACG GACAGATCTC CCTGTCCGGC
ACCGGCCCGG ACCTGCTCGC CGACGCGCAC CTGCGCGCCA CCTATCTCGG ACTGTGA
 
Protein sequence
MSSPALKVKG LHSGYGDIRV LRGVDIELPP GAVVALIGAN GAGKTTLLRT ISGLVPASAG 
SVEIGGTPIT ALPSHRVVEA GFVQSPEGKQ LFSGMSVMEN LMVGAHGRRA HARRHETLEE
VFDLFPILKE RRSQIASTLS GGQQQMVAVG RALMALPRVL ALDEPSLGLA PIMVDRLFES
IARIKARDLS ILIIEQNVFQ VLEMADYGYV LENGQISLSG TGPDLLADAH LRATYLGL