Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_1706 |
Symbol | |
ID | 5424785 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 1922011 |
End bp | 1923315 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640880952 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_001416608 |
Protein GI | 154245650 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.0138275 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCAGCG ACGGACTTCG CCGCCCGCCT TCCTGTTCCC GCCGGGGACT TCTCGCCCTC GCCGCGGTGC TGTTCAGCGC CGGCACGGCA CTGGCCCAGG CCCCCGCAGC GACGAGCGCA CCAGCCACCA TATCCATCGG CTGCGTGCTG CCGCTGTCGG GCGGCTCGGC CTCTGTGGGC AACCAGATCA AGGCCGGCAC CCAGATCGCG GTCGACCAGA TCAACCGCGA GGGCGGCATC AAGTCCATGG GCGGGGCAAA ACTTGCGGTG CTGTTCGGCG ACAGCCAGTC CAAGGCCGAC ATCGGCGTGA CCGAGACCGA GCGCCTGATC ACCCGCGAGA ATGTCGCCGC GCTGTGCGGC GCCTTCAACT CGGCGGTCAC GTTCCCGGCC ACCGAGGTGG CGGAGCGCTA CAAGACCCCC TGGGTGGTGC TCGGCGCGGT GAAGGACGAG ATCACCGAGC GCAATTTCAA ATATGTCTTC CGCATCAACA ACAAGGCGAA CTACGACGCG CGTGAGCAGG TCGACGCCAT CGATTTGCTC GCGCAGGAGA GCGGCAAGAA GCCGAAGACC ATCGCGCTCA TCTATGAGGG CTCCGACTGG GGCCGCTCCC ACGCCGCGAA TATCAAGAAG TTCGCCGCCG AGCGCGGCTA CGCCGTGGTG CTCGACGAAG CCGCGCCGCC CAACCAGGTC GACTTCTCCA ACCAGCTGCT GAAGGTGCGC GCGAGCCGCC CCGACGTGCT CATCGTCGCC TTCTACACCC CCGATCACCT GATCCTGTCG CGCCAGCTGA TGGACCAGCG GCTCGACATC CCCTTCGGCG TGCATTCGGT CGGCGGCGGC ACCGAGGACC CGGCCTTCTA CAAGGCCATC GCGCCCCGCG CCGTGGATTA TTACTTCGTG CAGGAAGACT TCCAGATCGA CATCGTCGAG GCCACCAAGG ATCCGGCCAT CCTCGATGCC GACAAGCGAT CCAAGGAAAT GCTGGGCTAC GGCCTCACCG CCTATTCGGC CCAGGGCCTT GCCACCATCT ATGTGATCCG GGATGCGCTG GAGCGCGCCG GCAGCGCCGA CCGCGAGAAG CTGCGCGACG CCCTCGCCGC CACCGACATC GCCGCAGGTC CCGCCCTTGC CGCCGGCTAC CAGCGCATCA AGTTCGATGC CCAGGGCCAG AACACCTTCG CCCACGGCGT GATCTCGGAG AACCTCGGCG GCAAGCGCCG CACCGTGTGG CCGAAAGACA ACCGCCTGCC CGACACCAAG CCCGTGTGGC CGGTGCCGGA GTGGTCCAAG CGACCCAATT CCTGA
|
Protein sequence | MPSDGLRRPP SCSRRGLLAL AAVLFSAGTA LAQAPAATSA PATISIGCVL PLSGGSASVG NQIKAGTQIA VDQINREGGI KSMGGAKLAV LFGDSQSKAD IGVTETERLI TRENVAALCG AFNSAVTFPA TEVAERYKTP WVVLGAVKDE ITERNFKYVF RINNKANYDA REQVDAIDLL AQESGKKPKT IALIYEGSDW GRSHAANIKK FAAERGYAVV LDEAAPPNQV DFSNQLLKVR ASRPDVLIVA FYTPDHLILS RQLMDQRLDI PFGVHSVGGG TEDPAFYKAI APRAVDYYFV QEDFQIDIVE ATKDPAILDA DKRSKEMLGY GLTAYSAQGL ATIYVIRDAL ERAGSADREK LRDALAATDI AAGPALAAGY QRIKFDAQGQ NTFAHGVISE NLGGKRRTVW PKDNRLPDTK PVWPVPEWSK RPNS
|
| |