| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1682 |
|---|
| Symbol | rplB |
|---|
| ID | 5425338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 1898853 |
|---|
| End bp | 1899686 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640880928 |
|---|
| Product | 50S ribosomal protein L2 |
|---|
| Protein accession | YP_001416584 |
|---|
| Protein GI | 154245626 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0090] Ribosomal protein L2 |
|---|
| TIGRFAM ID | [TIGR01171] ribosomal protein L2, bacterial/organellar |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0463749 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000149038 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCTGA AGCATTTCAA GCCGGTCACG CCGAGCCTTC GCCAGCTCGT GATCGTGGAC
CGCTCCGGCC TCTACAAGGG CAAGCCGGTG AAGACGCTGA CCGAGGGCAA GAGCTCCTCG
GGCGGCCGCA ACAATAACGG CCGCATCACC GTCCGCTTCC GCGGCGGTGG TCACAAGCAG
ACCTATCGCC TGGTGGATTT CAAGCGCACC AAGCGCGGCG TCCCGGCGGT GGTGGATCGG
ATCGAATATG ATCCGAACCG CTCGGCCTTC ATCGCCCTCA TCAAGTATGA GGACGGCGAC
CTGGCCTACA TCCTGGCGCC GCAGCGCCTC GCGGTCGGCG ACCAGGTGAT CGCCGGCGAG
CAGGTTGACG TGAAGCCGGG CAATGCCGGT CCGCTGTCCT CGCTGCCGGT GGGCACCATC
GTCCACAACG TGGAGCTGAA GGTGGGCAAG GGCGGCCAGA TCGCCCGGTC CGCCGGCACC
TACGCGCAGA TCGTCGGCCG CGATCAGGGC TATGTGATCG TTCGCCTGAA TTCGGGTGAG
CAGCGCCTCG TTCTCGGGGC GTGCTACGCC ACCGTGGGCG CGGTCTCCAA CCCCGACCAC
ATGAACATCT CGCTCGGCAA GGCCGGGCGT AACCGGTGGC TGGGTCGCAA GCCGCATAAC
CGCGGCGTGA CCATGAACCC GGTCGACCAT CCGCACGGCG GCGGCGAAGG CCGCACCTCC
GGTGGCCGTA ACCCGGTCAC CCCCTGGGGC TTCCCCACCA AGGGCAAGAA GACCCGCAAC
AACAAGGCGA CGGACAAGTT CATCGTGTCC AGCCGCCACA AGCGGAAGAA GTGA
|
|---|
| Protein sequence | MALKHFKPVT PSLRQLVIVD RSGLYKGKPV KTLTEGKSSS GGRNNNGRIT VRFRGGGHKQ
TYRLVDFKRT KRGVPAVVDR IEYDPNRSAF IALIKYEDGD LAYILAPQRL AVGDQVIAGE
QVDVKPGNAG PLSSLPVGTI VHNVELKVGK GGQIARSAGT YAQIVGRDQG YVIVRLNSGE
QRLVLGACYA TVGAVSNPDH MNISLGKAGR NRWLGRKPHN RGVTMNPVDH PHGGGEGRTS
GGRNPVTPWG FPTKGKKTRN NKATDKFIVS SRHKRKK
|
|---|
| |