| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1678 |
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| Symbol | rpsJ |
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| ID | 5424567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 1896846 |
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| End bp | 1897154 |
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| Gene Length | 309 bp |
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| Protein Length | 102 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640880924 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_001416580 |
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| Protein GI | 154245622 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.196634 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000449756 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAACGGCC AGAACATTCG AATTCGCCTG AAGGCGTTCG ATCACCGCAT CCTCGATGCG
TCGACGCGCG AGATCGTCGC CACGGCCAAG CGCACGGGTG CGCAGGTGCG CGGCCCGATT
CCGCTGCCGA CGCGGATCGA GAAGTTCACC GTCAATCGCT CTCCGCACAT CGACAAGAAG
TCGCGCGAGC AGTTTGAGAT GCGTACTCAC AAGCGGTTGC TCGATATCGT CGATCCGACT
CCCCAGACCG TGGACGCGCT GATGAAGCTC GACCTCGCCG CTGGCGTCGA CGTCGAAATC
AAGCTCTGA
|
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| Protein sequence | MNGQNIRIRL KAFDHRILDA STREIVATAK RTGAQVRGPI PLPTRIEKFT VNRSPHIDKK
SREQFEMRTH KRLLDIVDPT PQTVDALMKL DLAAGVDVEI KL
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