Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_1667 |
Symbol | fumC |
ID | 5424380 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 1885406 |
End bp | 1886794 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640880913 |
Product | fumarate hydratase |
Protein accession | YP_001416569 |
Protein GI | 154245611 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0452593 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCC GCATCGAGAC CGACACGTTC GGTCCCATCG AAGTTCAATC CGACCGTTAT TGGGGTGCGC AGGCGCAGCG CTCGCTGGGG AACTTCAAGA TCGGCTGGGA AAAGCAGCCG CTCCCGGTGG TGCGCGCCCT CGGCATCGTC AAGCGTGCTG CCGCGGAAGT AAACCGCGAC CTCGGCCGCC TCGATCCCAA GATCGCCGAC GCCATTGTCG CCGCCGCCCA GGAAGTCATC GACGGCAAGC TCGATGAACA CTTCCCGCTG GTGGTCTGGC AGACCGGCTC GGGCACCCAG TCCAACATGA ACGCCAACGA GGTGATCTCG AACCGGGCCA TCGAGCTGCT CGGCGGGGAG AAGGGCTCCA AGAAGCCCGT GCATCCCAAC GATCACGTCA ACATGAGCCA GTCGTCCAAC GACACCTACC CCACCGCCAT GCACATCGCC TGCGCGGAGG AGATCGTCCA CCGCCTGCTG CCGGCGCTGC GCCACCTGCA TGCGGCGCTG AAGGCCAAGT CCGAGGCCTG GGCCGGCATC ATCAAGATCG GCCGCACCCA CACCCAGGAC GCCACGCCGC TGACGCTGGG CCAGGAATTC TCCGGCTACG CCCAGCAGGT GGAGAACGGC ATCGCCCGCC TGGAACTGAC CCTGCCGGGC CTCCAGCAGC TGGCCCAGGG CGGCACCGCG GTGGGCACCG GCCTCAACGC CCCCGTCGGC TTCGCCGAGC AGGTCGCGGC GAAGATCGCC GCCATCACCG GCATCGCCTT CACCTCGGCG CCCAACAAGT TCGAGGCGCT CGCCGCCCAT GACGCCATGG TGTTCTCCCA CGGTGCCATC AACACGCTGG CGGCCTCCCT GTTCAAGATC GCCAACGACA TCCGCCTGCT CGGCTCGGGT CCGCGCTCGG GCCTTGGCGA GCTGTCGCTG CCGGAGAACG AGCCCGGCTC GTCCATCATG CCGGGCAAGG TGAACCCCAC CCAGTGCGAG GCGCTGACCC AGGTCTGCGT GCAGATCTTC GGCAACAACG CCGCGCTCAC CTTCGCCGGC AGCCAGGGCC ACTTCGAGTT GAACGTGTAC AACCCGGTGA TGGCCTACAA TTTCCTCCAG TCGGTGCGGC TGATGGCGGA CGCGGCGGTG AGTTTCACCG ACAATTGCGT CGTCGGCATC GAGGCCCGCG AGGACAACAT CAAGTCGGCG CTGGAGCGCT CGCTCATGCT GGTCACCGCG CTGGCTCCGA AGATCGGCTA CGACAACGCC GCCAAGATCG CCAAGACCGC GCACAAGAAT GGCACCACCC TGCGCGAGGA GGCCGTTGGC GGCGGCTATG TGACCAACGA GGAGTTCGAC GCCGTCGTGC GTCCCGAGAA CATGATCTCG CCCGGCTGA
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Protein sequence | MSTRIETDTF GPIEVQSDRY WGAQAQRSLG NFKIGWEKQP LPVVRALGIV KRAAAEVNRD LGRLDPKIAD AIVAAAQEVI DGKLDEHFPL VVWQTGSGTQ SNMNANEVIS NRAIELLGGE KGSKKPVHPN DHVNMSQSSN DTYPTAMHIA CAEEIVHRLL PALRHLHAAL KAKSEAWAGI IKIGRTHTQD ATPLTLGQEF SGYAQQVENG IARLELTLPG LQQLAQGGTA VGTGLNAPVG FAEQVAAKIA AITGIAFTSA PNKFEALAAH DAMVFSHGAI NTLAASLFKI ANDIRLLGSG PRSGLGELSL PENEPGSSIM PGKVNPTQCE ALTQVCVQIF GNNAALTFAG SQGHFELNVY NPVMAYNFLQ SVRLMADAAV SFTDNCVVGI EAREDNIKSA LERSLMLVTA LAPKIGYDNA AKIAKTAHKN GTTLREEAVG GGYVTNEEFD AVVRPENMIS PG
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