Gene Xaut_1661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1661 
Symbol 
ID5424439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1880330 
End bp1881826 
Gene Length1497 bp 
Protein Length498 aa 
Translation table11 
GC content68% 
IMG OID640880907 
Productprotease Do 
Protein accessionYP_001416563 
Protein GI154245605 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.179012 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACC CGCTTCGTTC CTCAGCTCCT GCCGCCCGCC TGCCCGCCTT CGTCCTGGCA 
GCCGCCCTCG CACTCCTCAC CGCGACCTTT TCCACCCTCG CCCCGGCTCC GCTGCTGGCG
GCGCCCGGCA AGGGGCCGGA CACGGTGGCG GACGTGGCCG AGCGGGTCAT GGACGCGGTG
GTGAACATCT CCACCTCGCA GAACGTGGCT GCCTCGCGCT CGGTGCCCCA GCCGCAGCTG
CCGCCGGGCT CGCCGTTCGA GGACTTCTTT GATGAATTCT TCAAGAAGAG GCAGGATGAC
GGCGGCGAGC AGCGCTCGCG CCGCGTGTCC TCCCTCGGCT CGGGCTTCGT CATCGACCCG
TCCGGCCTCA TCGTGACCAA CAATCACGTG ATCGCCGACG CCGACGAGAT CTTCGCCAAT
TTCAACGACG GCTCGAAGCT GAAGGCCGAG CTGATCGGCC GCGACACCAA GACCGACCTC
GCCCTGCTGC GTGTGAAGCC CGACAAGCCG CTGGTGGCGG TGAAGTTCGG CGACAGCGAG
AAGCTGCGGG TGGGCGACTG GGTGATGGCC ATCGGCAACC CGTTCGGCCT CGGCGGCACG
CTGACGGTTG GCGTGGTCTC CGCCCGCAAC CGCGACATCA ATTCCGGCCC CTACGACAAT
TTCATCCAGA CCGACGCCGC CATCAATCGC GGCAATTCCG GCGGCCCGCT GTTCAACATG
GACGGCGAGG TGATCGGCAT CAACACCGCC ATCATCTCGC CCTCGGGCGG CTCCATCGGC
ATCGGCTTCG CGGTGCCGTC CGCCACCGCC AAGCCGGTGA TCGCCCAGCT CGGCGAGTTC
AAGGAAGTGC GGCGCGGCTG GATCGGGGTG CGCATCCAGC CGGTCACCGA CGACATCGCC
GAGAGCCTCG GCCTCGGCAA GCCGCGCGGC GCGCTCATCG GCGTGGTCTC GGAGAACAGC
CCGGCGGCGC GGGGCGGCAT CAAGGCCGGC GACGTGATCG TGAAGTTCAA TGGCCGCGAC
ATCAAGGAGG TGCGCGACCT CACCCGCACC GTGGCCGACG CCATGGCGGA CACCGAGGTG
GAGGTGGTGG TGGTCCGCAA GGGCAAGGAA GAGACCCTGC ACCTCAAGGT CGCCCGCATG
CCCGAGGACG ATAAGCCGGA GACCCCCAAG CCCGCCGCCG AGTCGCAGAA AGTAGCGCCC
AAAAAAGCCC TCGGCATCGA GCTCTCCGCC ATGAGCGACG AGCTGCGCAA GCGCTATTCC
ATCAAGAGCG AGATCAACGG CGTGGTCATC ACCGGCGTCG ATGCCTCCAC CCCTGCCTCG
GACAAGGGGC TGAAGGCCGG GCAGGTCATC GTCCAGGTGG GGCAGGAAGC GGTGGCGAGC
CCCTCCGACG TGGAGAAGCA GGTGGATGCC CTGCGCAAGC AGGGCAAGCG CTCCGCCCTG
CTCCTCGTCT CCGATGGCGA GGGCAAGCAG GAGTTCGTGA CGATCCCGCT GAACTGA
 
Protein sequence
MPHPLRSSAP AARLPAFVLA AALALLTATF STLAPAPLLA APGKGPDTVA DVAERVMDAV 
VNISTSQNVA ASRSVPQPQL PPGSPFEDFF DEFFKKRQDD GGEQRSRRVS SLGSGFVIDP
SGLIVTNNHV IADADEIFAN FNDGSKLKAE LIGRDTKTDL ALLRVKPDKP LVAVKFGDSE
KLRVGDWVMA IGNPFGLGGT LTVGVVSARN RDINSGPYDN FIQTDAAINR GNSGGPLFNM
DGEVIGINTA IISPSGGSIG IGFAVPSATA KPVIAQLGEF KEVRRGWIGV RIQPVTDDIA
ESLGLGKPRG ALIGVVSENS PAARGGIKAG DVIVKFNGRD IKEVRDLTRT VADAMADTEV
EVVVVRKGKE ETLHLKVARM PEDDKPETPK PAAESQKVAP KKALGIELSA MSDELRKRYS
IKSEINGVVI TGVDASTPAS DKGLKAGQVI VQVGQEAVAS PSDVEKQVDA LRKQGKRSAL
LLVSDGEGKQ EFVTIPLN