| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1653 |
|---|
| Symbol | |
|---|
| ID | 5424736 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1871168 |
|---|
| End bp | 1873474 |
|---|
| Gene Length | 2307 bp |
|---|
| Protein Length | 768 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640880899 |
|---|
| Product | 1A family penicillin-binding protein |
|---|
| Protein accession | YP_001416555 |
|---|
| Protein GI | 154245597 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.64242 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGAGC GCGAACCGAC CGACCCCAAG GCCCGCGACG AGAACGCCCG CGACGACAAG
CGCCCCGACG ACCTGCGCCC CGATTCGAGG CGTCCCGCCC CGGAGCGCTC CTCGTTCGGC
ACGCGCCTGC GCGGGCTGAT GCTCGATTTC GACGCCCTGC TCGACAGCGG GCTGTTCAGC
CTCGGCGCGC GCACCCGCCG GGCGGTTTCC GCCTATGCGG CCTTCACCGA GCGGTTCAAC
CTCACCGGCG TGTCGCGCTT CGCCGCCGGC ATGGCCTCCG AAGGCCTGAC CCTGACGCTG
GCCGGCGCGC TGGTGATGCT GGCCCTGGCC ATCCCGGCCT TCCGCGAAAC CTCCGACGAC
TGGCTCAAGC GCACCGAACT CGCCGTCACC TTCCTCGATC GCTACGGCAA TACCATCGGC
GAGCGGGGCG TGAAGCAGAA CGACACGGTG CCGCTGGAGG ACATCCCCGA CAACCTCATC
AAGGCGACGC TCGCCACCGA GGACCGGCGC TTCTACGAGC ACTGGGGCAT CGATGTGGCC
GGCACGTTCC GCGCCGTGGT CACCAATGCG CGGGCCGGCG GCGTGCGGCA GGGCGGCTCC
TCGCTCTCCC AGCAGTTGGC CAAGAACCTG TTCCTGTCCA ACGAGCGCAC CATCGAGCGC
AAGATCAAGG AAGCCTTCCT TGCCATCTGG CTGGAGGCGC GCCTCACCAA GAGCCAGATC
CTGAAGCTCT ACCTCGACCG CGCCTATCTC GGCGGCGGCG CTTACGGGGT GGATGCGGCG
GCGCGCTATT ATTTCGGCAA GTCGGTGCGC GAGGTGAACC TCGCCGAGGC CGCCATGATG
GCCGGCCTGT TCAAGGCGCC GTCCAAATAC GCCCCCCACG TGAACCTGCC CGCCGCCCGT
GCCCGCGCCT CCACCGTGCT CGACAATCTG GTGGATGCCG GCTTCATGAC CGAGGGCCAG
GTGTTCGGCG CCCGCCGCAA CCCGGCCACC CCGGTGGACC GTCGCGACGA CGACGTGCCG
GATTTCTATC TCGATTACGC CTTCGGCGAG GTGAAGAAGC TGGTGGACCA GCTGCCGCCC
ACGGTGGTGG AGCGCAACTT CATCGTGCGC ACCGGCCTCG ACCCCAACAT CCAGAAGGTG
GCGGACGCGG CGCTGGAGAC CTCGCTCGCC GAGTTCGGCC GCGATTACAA GGTGAAGCAG
GGCGGCATCG TGGTGATGGA GCCCAACGGC ACCCTGCGCA CCATGGTGGG CGGGCGCGAC
TATGGCGAAA GCCAGTTCAA CCGCGCCACC GATGCCCTGC GCCAGCCCGG CTCCTCCTTC
AAGCCCTTCG TCTACACGGT GGCGCTGATG AACGGCTTCA AGCCGTCCAC CATCGTGCAG
GACGCGCCCA TCTGCCTCGG CAACTGGTGC CCGCAGAATT ACGGCCGCTC CTACATGGGC
TCCATCACCC TGAAGACGGC GCTCCAGCAT TCGCTGAACA CGGTGGCGGT GCGCCTCGCG
GAGAAGTTCG GCCGCAAGAA GATCGTGGAT CTCGCCCACC AGATGGGCAT CCGCACCCAG
CTGCCCATCA GCGCGCCGCT GCCGCTGGGC GCCGCCGAGG TGACCCTGTT CGACATGACC
ACCGCCTATT CGGTGTTCGC CAACGGCGGC AAGAGCGTCT ATCCCCACGC GGTGGTGGAG
ATGCGCGTCG GCAATGGCGA GGTGGTGTGG CGCTTCGACC GCGACGCGCC CAAGAGCGTG
CAGATCATCC CCACCCAGCA GCTCTATGAC ATCAACGACA TGCTGAACAA CGTGGTGGAG
AACGGCACCG GCCGCCGCGC CCGCCTCGTC AATTCCAAGG TGGCGGGCAA GACCGGCACC
ACCAATGCCT ATCGCGATGC CTGGTTCATG GGCTTCACCG GCAATTACGT GGCCGGGGTG
TGGTTCGGCA ACGACGACTA TGCCGTGATG AACAAGATGA CCGGCGGCAC CCTGCCCGCC
ATGACCTGGC AGAAGGTGAT GGCCTATGCC CACCAGGGCA TCGAGATCAA GCCGATCCCC
GGCGTCACCT CGCCGATCCC GAAGCTGGAC GAGACACCCG CGCCCATGAA CGTGCCGGGC
CTCGACACCG AGCGGCCGGT CACCCTCTCC CCGCGCGCGG CCGAACGGCT CGCGGCGCTG
GAGCGCATGC TGAAGGAGGC CGAGGTCCGC CTCACCGATG CCACCCCGGC CGCCCCGCCC
CAACCCGCCG CCCGTTCCGC CGGCCCTGCA GTTCCGAGTG CGCCCCCCGG TGCGGCCCCG
ATGCCCGCAC CGGTGCAGCG CAACTGA
|
|---|
| Protein sequence | MTEREPTDPK ARDENARDDK RPDDLRPDSR RPAPERSSFG TRLRGLMLDF DALLDSGLFS
LGARTRRAVS AYAAFTERFN LTGVSRFAAG MASEGLTLTL AGALVMLALA IPAFRETSDD
WLKRTELAVT FLDRYGNTIG ERGVKQNDTV PLEDIPDNLI KATLATEDRR FYEHWGIDVA
GTFRAVVTNA RAGGVRQGGS SLSQQLAKNL FLSNERTIER KIKEAFLAIW LEARLTKSQI
LKLYLDRAYL GGGAYGVDAA ARYYFGKSVR EVNLAEAAMM AGLFKAPSKY APHVNLPAAR
ARASTVLDNL VDAGFMTEGQ VFGARRNPAT PVDRRDDDVP DFYLDYAFGE VKKLVDQLPP
TVVERNFIVR TGLDPNIQKV ADAALETSLA EFGRDYKVKQ GGIVVMEPNG TLRTMVGGRD
YGESQFNRAT DALRQPGSSF KPFVYTVALM NGFKPSTIVQ DAPICLGNWC PQNYGRSYMG
SITLKTALQH SLNTVAVRLA EKFGRKKIVD LAHQMGIRTQ LPISAPLPLG AAEVTLFDMT
TAYSVFANGG KSVYPHAVVE MRVGNGEVVW RFDRDAPKSV QIIPTQQLYD INDMLNNVVE
NGTGRRARLV NSKVAGKTGT TNAYRDAWFM GFTGNYVAGV WFGNDDYAVM NKMTGGTLPA
MTWQKVMAYA HQGIEIKPIP GVTSPIPKLD ETPAPMNVPG LDTERPVTLS PRAAERLAAL
ERMLKEAEVR LTDATPAAPP QPAARSAGPA VPSAPPGAAP MPAPVQRN
|
|---|
| |