| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1638 |
|---|
| Symbol | thrS |
|---|
| ID | 5424798 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1856211 |
|---|
| End bp | 1858193 |
|---|
| Gene Length | 1983 bp |
|---|
| Protein Length | 660 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640880885 |
|---|
| Product | threonyl-tRNA synthetase |
|---|
| Protein accession | YP_001416541 |
|---|
| Protein GI | 154245583 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0441] Threonyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00418] threonyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.360122 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTCCC TGACCTTCCC CGACGGCGCC AAGCGCGACT ATGCCGAGGG GACGTCCGGC
GCGGACATCG CCGCCGCCAT TTCCAAGTCA CTCGCCAAGA AGGCCGTCGC CGTCACCCTC
GACGGTGCGC TCACCGACCT GTCCGAGCCC ATCACCCGCG ACGCCAAGCT GGAGATCGTC
ACCCGCGACG ACCCGCGCGC GCTGGAGCTG ATCCGCCATG ACTGCTCGCA CGTCATGGCG
GAGGCGGTGC AGGAGCTGTG GCCGGGCACG CAGGTGACCA TCGGCCCGGT GATCGAGAAC
GGCTTTTATT ACGACTTCGC CCGCAACGCC CCCTTCACCA CCGAAGACCT GCCGGTCATC
GAGAACAAGA TGCGCGAGAT CATCGCCCGC GACCGCCCCT TCACCAAGGA GGTGTGGACC
CGCGACGAAG CCAAGCGCGT GTTCGCCGCC AAGGGCGAGG GCTACAAGGT CGAGCTGGTG
GATGCCATCC CGTCCGACCA GGACGTGAAG ATCTACAAGC AGGGCGAGTG GTTCGACCTC
TGCCGCGGCC CGCACATGCC CTCCACGGGC AAGATCGGCA CCGCCTTCAA GCTGATGAAG
GTGGCGGGCG CCTATTGGCG CGGCGATTCG AACAACCCCA TGCTCACCCG CATCTACGGC
ACAGCCTGGC AGGACGAGAA GGAGCTCAAC GCCTACATCC ATCGACTGGA GGAGGCGGAG
AAGCGCGACC ATCGCCGCCT CGGCCGCGAG ATGGACCTGT TCCACTTCCA GGAGGAAGGC
CCCGGTACGG TATTTTGGCA CCCCAAGGGC TGGACCCTGT TCCAGGAACT GGTGGCCTAC
ATGCGCCGGC GCCTGAAGGC CGACTACAAC GAGGTCAACG CCCCGCAGGT ACTCGACGCC
GGCCTGTGGG AGACCTCCGG CCACTGGGGC TGGTACAAGG AAAACATGTT CAAGGTGCAG
TCCGCGGGCG ACGAGACCAA GGACGAGCGC GTGTTCGCCT TGAAGCCCAT GAACTGCCCC
GGCCATGTGC AGATCTTCAA GCACGGTCTT AAGAGTTACC GCGATCTACC TCTGCGCCTT
GCGGAATTCG GCGCGGTGCA TCGCTACGAA CCGTCCGGTG CGCTGCATGG CCTCATGCGC
GTGCGCGGCT TCACCCAGGA CGACGCCCAC GTCTTCTGCA CCGAGGAGCA GATGGCGGCC
GAGTGCCTGA AGATCAACGA CCTGATCCTC TCCACCTATG CCGATTTCGG CTTCGACGAG
ATCGTCGTGA AGCTATCCAC GCGGCCGGAG AAGCGCGTGG GCTCGGATGC GGTGTGGGAT
CACGCCGAGG AGGTGATGAC CCGCGTGCTC GCCGAGATCG AGGCGGCCTC GGGCGGGCGC
ATCAAGACCG GCATCCTGCC CGGCGAGGGC GCCTTCTACG GCCCCAAGTT CGAATACACC
CTGAAGGACG CCATCGGCCG TGAATGGCAG TGCGGTACCA CCCAGGTAGA CTTCAACCTG
CCCGAGCGGT TCGGCGCCTT CTACGTGGAC GCGGACGGCC AGAAGAAGAC TCCGGTGATG
ATCCACCGCG CCATCTGCGG CTCCATGGAG CGCTTCACCG GCATCCTCAT CGAGCATTTC
GCCGGCCACT TCCCGCTCTG GCTCGCCCCC ACGCAGGTGG TGGTGGCCAC CATCACCTCG
GATGCGGACG ACTATGCCGC CGAGGTGGCG GAGCTGCTGA AGGCGGAAGG CCTGCGCGTG
GAACTCGACG TGCGCAACGA GAAGATCAAC CTGAAGGTGC GCGAGCACTC CCTCGCCAAG
GTTCCGGTGC TGCTGGTGGC GGGCAAGAAG GAGGCGGCCG AGCGCACCCT CTCTATCCGC
CGCCTCGGCT CCAATGCCCA GACCGGCGGA ACGCTGGACG AGGTGGTGGC GGCGCTGGTG
GATGAGGCCG TGCCGCCGGA CCTCAAGCGC AAGGCTCTGG CCAAGGCCGA ACGGGCGGCC
TGA
|
|---|
| Protein sequence | MISLTFPDGA KRDYAEGTSG ADIAAAISKS LAKKAVAVTL DGALTDLSEP ITRDAKLEIV
TRDDPRALEL IRHDCSHVMA EAVQELWPGT QVTIGPVIEN GFYYDFARNA PFTTEDLPVI
ENKMREIIAR DRPFTKEVWT RDEAKRVFAA KGEGYKVELV DAIPSDQDVK IYKQGEWFDL
CRGPHMPSTG KIGTAFKLMK VAGAYWRGDS NNPMLTRIYG TAWQDEKELN AYIHRLEEAE
KRDHRRLGRE MDLFHFQEEG PGTVFWHPKG WTLFQELVAY MRRRLKADYN EVNAPQVLDA
GLWETSGHWG WYKENMFKVQ SAGDETKDER VFALKPMNCP GHVQIFKHGL KSYRDLPLRL
AEFGAVHRYE PSGALHGLMR VRGFTQDDAH VFCTEEQMAA ECLKINDLIL STYADFGFDE
IVVKLSTRPE KRVGSDAVWD HAEEVMTRVL AEIEAASGGR IKTGILPGEG AFYGPKFEYT
LKDAIGREWQ CGTTQVDFNL PERFGAFYVD ADGQKKTPVM IHRAICGSME RFTGILIEHF
AGHFPLWLAP TQVVVATITS DADDYAAEVA ELLKAEGLRV ELDVRNEKIN LKVREHSLAK
VPVLLVAGKK EAAERTLSIR RLGSNAQTGG TLDEVVAALV DEAVPPDLKR KALAKAERAA
|
|---|
| |