| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1550 |
|---|
| Symbol | |
|---|
| ID | 5422740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1761186 |
|---|
| End bp | 1763027 |
|---|
| Gene Length | 1842 bp |
|---|
| Protein Length | 613 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640880798 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_001416455 |
|---|
| Protein GI | 154245497 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases
[COG2066] Glutaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCGAATT TCCTGCCCCT TGCCACGACG CCCCTCGAAA CACCGCTGCT GCGCGCCATC
CGGGATATCC ACACCCGCTT CACGCCCCTG CATGACGGCG AGGTCGCCTC CTACATCCCG
GAACTGGGCA AGGCCGACCC GGACCATTTC GGGATCGCCG TGGCCACCAC CGACGGCCAT
GTCTATGAAG CGGGCGACAC GGCCGTGCCG TTCACCATCC AGTCGGTGTC CAAGGCCATC
GTCTACGCCC TCGCCCTCGA CATGCTGGGG TCCGAGAAGG TGGAGGCAGC CATCGGCGTG
GAGCCGAGCG GCGAGGCCTT CAATTCCATC CGCCTGAAGG CCGACAACCG CCCCTTCAAC
GCCATGGTGA ATGCCGGCGC CATCTGCTGC AGCGGGCTTC TCGCCGAGGC TGCCGGCGAC
GAGGCCTTCG AGCTGATCCG CACCACGCTC AGCCGCTTTG CCGGGCGCGA GCTGGAGGTG
GACGATGCGG TGTTCCAGTC GGAGCGCCAG ACCGGCGACC GCAACCGCGC CATCGCCTAC
CTGCTGCGCA CCTATGGCGG CGTGCGGGGC GACGTGGATC ACATCCTCGA CACCTATTTC
CGCCAGTGCT CGGTTCTGGT CACCGCCCGC GACCTGGCGG TGATGGGGGC GAGCTTCGCC
AATCACGGGG TCAATCCGGT GACCGGGGAG ATGGTGGCCT CAAACTACGC CGTGGCGCGC
ACCCTGGCGG TGATGATCTC CTCCGGCATG TATGACTTTG CCGGCGAGTG GATCTATCGG
GTGGGCGTGC CGGCCAAGAG CGGCGTCGGT GGCGGCATTC TCGCCGCTTT GCCCTCCCAG
CTGGGCCTCG GCATCTTCTC GCCCCGGCTC GATGCCCATG GCAACAGCGT GCGCGGCCTG
CGCACCTGCT CCGCCCTCTC CGACGCCTTC GACCTGCACA TGCTGTCGCG GCGCGACGAC
GTGCGCACCT GCATCGCCGC CGACTACGAT TTCCGCACCG TGCCCTCCAA GCCCGGGCGC
CAGCCCCACG AGCAGAGCAT CCTGGAACAG CGCTCCGGCT CCATCCGCGT GCTGGAACTG
GCCGGCAAGC TCTCCTTCGC CACCATGGAT TATGTGACCC GCCGGCTCAC CGATCCCGCA
GGCGTGCCGG CCTTCCTGAT CCTCAACCTG CACCGGGTCT CCACCATCAC CGATGCGGGG
CTGCGCCTGT TCACCGGCCT GATCCGCAAT CAGCTTCCGG CCTCCACCAC CACGGTGATC
GCCGGAGTTG AAGGCAACTC GCCGGTGGCG CCGCAGGTCA AGGCCATGAA GGAGGAAGGC
GTGCGCGTGC GCATCTTCCC CACCTACGAC GCCGCCGTGG ACTGGGCCGA GGACCAGATC
GTCTACCGCC ATGGCGGCTT CTCGCAGATC GGCATCGAAG CCGACCTGTC AGGCCAGGCG
CTGCTCGCCG GGCTGTCGCC GCAGGAACTG GCCGACCTCT CCCGCCTCGG CACCCGCGTG
GTGTTCGATG CCGGCACGCG GATCATCGAC GCCAATGAAC CGCCGGCCCG GGTCTATTTC
CTGGTGCGCG GCATGGTCAG CGTGCGCTCA ATGCACGACG TGCGCCTGTC GACGTTGATC
CCGGGCATGG CCTTCGGCGA GCTGGCGCTC ATCGATCAGC CGCGCAGTGC CGACGTGTGG
GCCGACACGG AGGCGGTCTG CCTGGAGATT TCCGCCGAGC AGTTCCGCGC CTTCCAGGAG
ACCCATGCCC GCGCCGCCGA CCGGATCATG CGCAACCTCG CCATCCTGCT GGCCGGCCGG
GTGCGCATGG CCACGGCGCG GATCGACATG CTGACGGGGT GA
|
|---|
| Protein sequence | MPNFLPLATT PLETPLLRAI RDIHTRFTPL HDGEVASYIP ELGKADPDHF GIAVATTDGH
VYEAGDTAVP FTIQSVSKAI VYALALDMLG SEKVEAAIGV EPSGEAFNSI RLKADNRPFN
AMVNAGAICC SGLLAEAAGD EAFELIRTTL SRFAGRELEV DDAVFQSERQ TGDRNRAIAY
LLRTYGGVRG DVDHILDTYF RQCSVLVTAR DLAVMGASFA NHGVNPVTGE MVASNYAVAR
TLAVMISSGM YDFAGEWIYR VGVPAKSGVG GGILAALPSQ LGLGIFSPRL DAHGNSVRGL
RTCSALSDAF DLHMLSRRDD VRTCIAADYD FRTVPSKPGR QPHEQSILEQ RSGSIRVLEL
AGKLSFATMD YVTRRLTDPA GVPAFLILNL HRVSTITDAG LRLFTGLIRN QLPASTTTVI
AGVEGNSPVA PQVKAMKEEG VRVRIFPTYD AAVDWAEDQI VYRHGGFSQI GIEADLSGQA
LLAGLSPQEL ADLSRLGTRV VFDAGTRIID ANEPPARVYF LVRGMVSVRS MHDVRLSTLI
PGMAFGELAL IDQPRSADVW ADTEAVCLEI SAEQFRAFQE THARAADRIM RNLAILLAGR
VRMATARIDM LTG
|
|---|
| |