| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1536 |
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| Symbol | |
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| ID | 5422583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 1745155 |
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| End bp | 1747071 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640880784 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_001416441 |
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| Protein GI | 154245483 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.747826 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCG CAATCACGGA CCCGGTAATC ACCGAGCCGA ATATGGCTCA TACCCATATG
CTGGCCCCGG ACGAGCCGGC CGGCGGCTGG CGCAGGGGCG TGCTCAAGGT GGAGCGCGCT
CTGATCAAGA TGGTGGAGAT TCCGGCGGCA CTCCTGGTGC TGGCGGAAGT GGTGGTGCTC
TTCGTCGGCG TGGTGATGCG CTACTTCGTG CATTCGCCCA TCGTCTGGTC GGACGAGCTG
GCCTCGGTCC TGTTCATCTG GCTGGCCATG CTGGGCTCCG TGGTGGCGCT CCAGCGCGGT
GAGCACATGC GCATGACCGC GCTGGTGGGG GCGCTGCCTC TGCCGAAGCG CGCGGTGCTG
GAAACGCTGG CCGTCGCCGC CCCGCTCATC TTCCTCGTGG CCATGCTCCA TCCCAGCCTG
GAATATGCCG AGGACGAGAT GTTCGTCACC CTGCCCGCCC TCGACGTGCC CAATACGTGG
AAGGCGGCGG CACTGCCAGT GGGCCTCGCG CTCATGGGCA TCGTCGCGAT GCTCAAGCTC
GTCCGCAACG CCAACCCCAT GCAGGTGGCG GGCGTCATCG CCTTCCTGGC GGCGCTGACC
GCCGTGGGCA TCCTCGGCAC GCCGGTTCTG AAGACGCTGG GCAACATCAA CCTCGTGATC
TTCTTTGTCG GCCTGGTGGC GGCGGGGGTG TTCGCGGGGG TGCCCATCGC CTTCTCCTTC
GGCCTCGCCA CGCTCGCCTA TCTCTCCTTC ACCACCAATG CCCCGCTGAC GGTGGTGGTG
GGCCGCATGG ACGAGGGCAT GAGCCACCTC ATCCTGCTCT CGGTGCCGCT GTTCGTGTTC
CTCGGCATGC TGATCGAGAT GACCGGCATG GCGCGGGCCA TGGTGGGCTT CCTCGCGAGC
CTCCTCGGCC ATGTGCGGGG CGGCCTGTCC TACGTGCTGA TCGGCGCCAT GTATCTCGTC
TCGGGCATTT CCGGCTCCAA GGCGGCGGAC ATGGCGGCGG TGACCCCGGT GCTGTTCCCG
GAGATGATCA AGCGCGGCGC CAAGCCCGGC GACCTCGTGG CCCTGCTGGC CGCCACCGGC
GCGCAGACCG AGACCATCCC GCCGAGCCTG GTGCTCATCA CCATCGGCTC GGTCACCGGC
GTGTCCATCG CCGCCCTGTT CGCCGGCGGC CTGATGCCCG CCGTCGTTCT CGGCGTCATG
CTGTGCATCC TGGTGCGCTG GCGCTACCGC AACGAGGACC TGTCCGGCGT GCGCCGGGCG
AGCAGGACGG AAATCCTGCG CGCCCTCGCC ATCGCCGTGC CGGCCATCGC CTTGCCGTTC
GTCATCCGGG CCGCGGTGAT GGAAGGCATC GCCACCGCCA CCGAGGTCTC CACCATCGGC
ATCGTCTATT CGGTGGTGGT GGGACTGCTG ATCTACCGGC AGTTCGACTT CAAGCGGCTG
ATGCCCATGC TCACCGCCAC GGCGGCGCTC TCGGGTGCCA TCCTGCTGAT CATCGGCGCG
GCCACCGGCA TGGCCTGGGC GCTCACCCAG TCCGGCTTCT CCCAGGAACT GGCGCGGGTG
ATGGGCGGCC TGCCCGGCGG GGCGGCGACC TTCATGGTGG TGTCTATCGT CGCCTTCATC
ATCCTGGGAT CGGTGCTGGA GGGCATCCCG GCCATCGTGC TGTTCGGGCC GCTGCTGTTC
CCCATCGCAC GCAGCATGGG CATCCATGAA GTCCACTATG CCATGGTGGT CATCCTCTCC
ATGGGCCTCG GCCTGTTCGC CCCGCCTTTC GGCGTCGGCT ACTACTGCGC CACGGCCATC
GGCGGGGTCA GCCCCGACGC CGGCATGAAG CCCATCGTCG GCTACATGGC CGCCCTGCTC
ATCGGCCTCG CGCTGGTCGC GGCCGTGCCG TGGTTCTCCA TCGGCTTCCT GCCCTGA
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| Protein sequence | MDRAITDPVI TEPNMAHTHM LAPDEPAGGW RRGVLKVERA LIKMVEIPAA LLVLAEVVVL
FVGVVMRYFV HSPIVWSDEL ASVLFIWLAM LGSVVALQRG EHMRMTALVG ALPLPKRAVL
ETLAVAAPLI FLVAMLHPSL EYAEDEMFVT LPALDVPNTW KAAALPVGLA LMGIVAMLKL
VRNANPMQVA GVIAFLAALT AVGILGTPVL KTLGNINLVI FFVGLVAAGV FAGVPIAFSF
GLATLAYLSF TTNAPLTVVV GRMDEGMSHL ILLSVPLFVF LGMLIEMTGM ARAMVGFLAS
LLGHVRGGLS YVLIGAMYLV SGISGSKAAD MAAVTPVLFP EMIKRGAKPG DLVALLAATG
AQTETIPPSL VLITIGSVTG VSIAALFAGG LMPAVVLGVM LCILVRWRYR NEDLSGVRRA
SRTEILRALA IAVPAIALPF VIRAAVMEGI ATATEVSTIG IVYSVVVGLL IYRQFDFKRL
MPMLTATAAL SGAILLIIGA ATGMAWALTQ SGFSQELARV MGGLPGGAAT FMVVSIVAFI
ILGSVLEGIP AIVLFGPLLF PIARSMGIHE VHYAMVVILS MGLGLFAPPF GVGYYCATAI
GGVSPDAGMK PIVGYMAALL IGLALVAAVP WFSIGFLP
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