| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1382 |
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| Symbol | |
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| ID | 5420741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 1585122 |
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| End bp | 1586861 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640880630 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001416287 |
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| Protein GI | 154245329 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.18968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGACTG CACGCCCCTT TTTCTCCCTG GCCCTTGCGG CCGGCTTTGC TGCGGTGCTC
CATCTCGCGG CGAGCCCGGC CCGCGCCGAA GCGGTCCCCG ACGTCGATAC CTCGCTGGCC
GGCAATTATC TCGCCGCGCG GCTCGCCAGC TCCGAGCGCG ATTCGGATGC GGCGGTGACC
TACCTGCGCA ACCTGATGAA GCTCGATGCG CGAAATGACG AGATCGTCGA GCGCACCTTC
TTCGCCATGC TCATGGATGG CGACATCGAC GAGGCCATGA AGCTGGCCGA CCGCATGGTG
AAGGCGGACC GCACCCACCG CATCGCCCGC CTCGCCCTGT CCGTTCGCGC CATCAAGAAG
GCGCACTACC AGACCGCCCG CACCAACCTC GCCCTTTCGG TGCGCGGCCC CATCGGCGAT
CTCACCGCCA CGCTGCTGGC CGCCTGGACC TTCTACGGCT CCGGCAACAC CAAGGGCGCG
GTGGAGCTCA TCGACCGGCT GGAAGGCCCC GACTGGTATG TGCCCCTGAA GGAACTGCAT
GCCGGCCTCA TCCTCGATGC CGCCGGGCAG AAGAAGGAAG CGGGCAAGCG CCTCGAGCAG
GCGATGAAGA TCGATCCCGG CTCGCTGCGC GCCATCGACG CCTATGCCCG CTGGGCCTCG
CGCAACGAGA GCATCGACGC GGCGCTGGCC GCCTATGGCA GCTTCGAGAA GCAGCTGCCC
AACCACCCCA TCGTGATGGC GGCCATCCGC GACCTGAAGG CGGGCAAGAC CCTGCCGCCG
CTGGTCAAGA CGGCGCAGGA GGGCTCCTCC GAGGTGCTCT ATGGCCTCGG CTCCACCGTG
GGCCGGCAGG GCGGCGAGGA CCTTGCCCTC GTCTATCTGC AGCTCGCCAT CTGGCTCTAT
CCCGAGCACC CCTTCGCCAG CCTGACGCTG GCCGATCTCT ATGAGCAGCT GAAGCAGCCC
TCCAAGGCCA TCGAGGTCTA TGAGAGCGTG CCGGACAGCT CGCCGCTGAA GCGCAACGCC
GAGGTCCAGC TGGCCGTCAA CCTCGACGCC GCCGACAAGT ACAAGGAGGC CCGCGCCCAT
CTGGACAAGA TGATTGCGGC CGACCCCAAG GACATCGAGG CCATCGTGGC GCTGGGCAAG
ATCCAGCAGT CGCGCAAGAT GTTCGCCGAA TGCGCTGAGA CCTATTCCAA GGCTATCGCC
CTCATTCCCC AGCCCACCAA GGGCAATTGG GCGCTGTTCT ATTTCCGCGG CATCTGCAAC
GAGCGCTCGA AGAACTGGCC GGCTGCGGAG GCCGACCTGA AGAAGGCGCT GGAACTGAAC
CCGGACCAGC CCCATGTGCT CAACTATCTG GGCTACAGCT GGGTGGACCA GGGCGTTAAC
CTCGACCAGG GCGTCGAGAT GATCCGCAAG GCAGCCAAGC TGCGGCCCGA CGACGGCCCC
ATCGTGGACA GCCTGGGCTG GGCTTATTAT CGCCTCGGTC GCTACGACGA GGCGGTGGTG
CAGCTTGAGC GCGCCATCGA GCTGATGCCG CAGGATCCGG TCATCAACGA CCATCTGGGC
GACGCCTACT GGAAGGTCGG CCGCAAGCTG GAGGCGGGCT TCCAGTGGGC CCACGCCCGC
GACCTCAAGC CCGAGCCGGA CGACCTGACC AAGATCGTCC AGAAGATCGA CAAGGGCCTT
GACGCGGTGG ACCAGCCGGC CCCCGTGCGC AAGGCCGAAG AGACCCAGAA GGGCGGTTGA
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| Protein sequence | MTTARPFFSL ALAAGFAAVL HLAASPARAE AVPDVDTSLA GNYLAARLAS SERDSDAAVT
YLRNLMKLDA RNDEIVERTF FAMLMDGDID EAMKLADRMV KADRTHRIAR LALSVRAIKK
AHYQTARTNL ALSVRGPIGD LTATLLAAWT FYGSGNTKGA VELIDRLEGP DWYVPLKELH
AGLILDAAGQ KKEAGKRLEQ AMKIDPGSLR AIDAYARWAS RNESIDAALA AYGSFEKQLP
NHPIVMAAIR DLKAGKTLPP LVKTAQEGSS EVLYGLGSTV GRQGGEDLAL VYLQLAIWLY
PEHPFASLTL ADLYEQLKQP SKAIEVYESV PDSSPLKRNA EVQLAVNLDA ADKYKEARAH
LDKMIAADPK DIEAIVALGK IQQSRKMFAE CAETYSKAIA LIPQPTKGNW ALFYFRGICN
ERSKNWPAAE ADLKKALELN PDQPHVLNYL GYSWVDQGVN LDQGVEMIRK AAKLRPDDGP
IVDSLGWAYY RLGRYDEAVV QLERAIELMP QDPVINDHLG DAYWKVGRKL EAGFQWAHAR
DLKPEPDDLT KIVQKIDKGL DAVDQPAPVR KAEETQKGG
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