| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1360 |
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| Symbol | |
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| ID | 5425091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 1561987 |
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| End bp | 1563555 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640880608 |
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| Product | tartrate/fumarate subfamily Fe-S type hydro-lyase alpha subunit |
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| Protein accession | YP_001416265 |
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| Protein GI | 154245307 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1838] Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain
[COG1951] Tartrate dehydratase alpha subunit/Fumarate hydratase class I, N-terminal domain |
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| TIGRFAM ID | [TIGR00722] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region
[TIGR00723] hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTTCCG CCCAAACAAG TTCCGCCCAA GCAGGTTCCG CCCAAATCCT CCGCACCGGC
CCTGCAAAAG TCATCCGCGA GGACGACATC ATCCAGAGCG TCGCCGACGC GCTCCAGTAC
ATCTCCTTCT TTCATCCGGC GGACTACATC GCCCATCTCG CCCGCGCCCA TGCGCGCGAA
GCCTCCCCCG CGGCGCGCGA TGCCATCGCC CAGATCCTCG TGAACTCGCG CATGGCGGCG
CTGGGGCGAC GGCCCATCTG CCAGGATACC GGCCTCGTGG TGGTGTTCGC CAAGGTGGGG
ATGGATGTGC GCATCGACAG CGCCCGCCCC TTCGCCGACC TCATCAACGA TGCCGTGCGC
CGCGCTTATC TGGACGAGGC CAATCCCCTG CGCGCCTCCA TGGTGGGGGA CCCGCTGTTC
GAGCGGCGCA ACACCAGGGA CAACGCCCCG GCGGTGGTGC ATGTGGAACT GGTGCCGGGC
GCCACGCTGG AGATCACGGT GGCGGCCAAG GGCGGCGGCT CGGAGAACAA GGCGAAGTTC
GTGACGCTGG ATCCCGGCGC CAGCGTCGAG GACTGGGTGC TGAAGACCGT GCCGGAGCTG
GGCGCCGGCT GGTGCCCGCC CGGTGTCATC GGCCTCGGCA TCGGCGGCTC GGCGGAAAAG
GCCATGCTGA TCGCCAAGGA GGCGCTCTTG GAGGAGATCG ACATGACCGA CCTCCTCGCC
CGCGGCCCCT CCAGCAAATT GGAGGAGATG CGCATCTCCC TCTACGAGAA GATCAACGCG
CTGGGCATCG GCGCGCAGGG CCTCGGCGGC CTGACTACAG TGGTGGACGT GAAGATCGCC
ACCTTCCCGA CCCATGCGGC GTCGAAGCCC GTGGCGCTCA TTCCCCAGTG CGCCGCCAAC
CGCCATGCCA CCATCGTGCT CGATGGCTCG GGGCCGGTGC GGCTCGATCC GCCGGACCTC
TCGGCCTGGC CGCAGATGGT GCTGGATGCC GCCGACGGAA GCGCCCGCCG GGTGAACCTC
GATGGGCTGA CGCGGGAGGA GGTCGGCTCC TGGACGCCGG GGCAGAAGCT GCTGCTGACC
GGCCGCATGC TCACCGGCCG CGACGCCGCC CATCAGCGCC TCACCGACAT GCTGAAGGCC
GGCACGCCCC TGCCGGTGAA CCTCGACGGG CGCGTCATCT ATTATGTCGG CCCGGTGGAC
CCGGTGGGGG ACGAGGCGGT GGGCCCGGCC GGCCCCACCA CCTCCACCCG CATGGATCGC
TACACCGATG CCATCCTCGG CACCGGCCTG CTCGCCATGG TGGGCAAGGC GGAGCGGGGG
CCGGCGGCGA TCGCGGCCAT CGCCCGGCAC AGGGCGGCCT ATCTCGTCGC CGTGGGCGGG
GCGGCCTATC TCGTCTCCAA GGCCATCAAG GCGGCGCGGG TGGTGGCCTT CGAAGACCTC
GGCATGGAGG CCATCTACGA GTTCGAGGTG GAGGACATGC CGGTGACGGT GGCAGTGAGC
GCCGCGGGCC AGTCCATCCA CACCCTTGGA CCGGCACTCT GGCGGGAGCG CATCGCCGCG
CAGCCCTGA
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| Protein sequence | MCSAQTSSAQ AGSAQILRTG PAKVIREDDI IQSVADALQY ISFFHPADYI AHLARAHARE
ASPAARDAIA QILVNSRMAA LGRRPICQDT GLVVVFAKVG MDVRIDSARP FADLINDAVR
RAYLDEANPL RASMVGDPLF ERRNTRDNAP AVVHVELVPG ATLEITVAAK GGGSENKAKF
VTLDPGASVE DWVLKTVPEL GAGWCPPGVI GLGIGGSAEK AMLIAKEALL EEIDMTDLLA
RGPSSKLEEM RISLYEKINA LGIGAQGLGG LTTVVDVKIA TFPTHAASKP VALIPQCAAN
RHATIVLDGS GPVRLDPPDL SAWPQMVLDA ADGSARRVNL DGLTREEVGS WTPGQKLLLT
GRMLTGRDAA HQRLTDMLKA GTPLPVNLDG RVIYYVGPVD PVGDEAVGPA GPTTSTRMDR
YTDAILGTGL LAMVGKAERG PAAIAAIARH RAAYLVAVGG AAYLVSKAIK AARVVAFEDL
GMEAIYEFEV EDMPVTVAVS AAGQSIHTLG PALWRERIAA QP
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