| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1310 |
|---|
| Symbol | |
|---|
| ID | 5424299 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 1505447 |
|---|
| End bp | 1506586 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640880558 |
|---|
| Product | phosphonate metabolism protein PhnM |
|---|
| Protein accession | YP_001416216 |
|---|
| Protein GI | 154245258 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3454] Metal-dependent hydrolase involved in phosphonate metabolism |
|---|
| TIGRFAM ID | [TIGR02318] phosphonate metabolism protein PhnM |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.210169 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAC AGGTGTTCGC CAATGCCCGC CTCGTCCTCG CCGACGAGAT CGTCACCGGC
CACCTCACGG TGCGCGACGG CCGCATCCAT GCCATCGGCA CCGGCGCGGC GCCCCAATGC
GCGCAGGACC TGGAGGGCGA TTTTCTTCTT CCCGGCCTCG TAGAGTTGCA CACTGACCAT
GTGGAAGGCC ACCTTGCGCC CCGCCCCAAG GTGCGCTGGA ACCCGCTCGC CGCCGTGCTC
GCCCATGATG CGCAGATCGC CGCCTCCGGC ATCACCACCG TGTTCGACAG CCTGCGGGTG
TGGCCGGACA AGAAGGCGGT GGGCATGGAC GGTGACGCGC CCGTCCTCAT CCGCGCCCTG
AAGGAGGCCC GCGCCGCCGG CGTGCTGCGG GCCGATCATC TCATCCACCT GCGCTGCGAG
GTGCCCACCG ACACGGTGGT GGAGGATGCC GCCGCCATCC TTGAAACCAC CGACGTGCAC
CTGATCTCGC TCATGGACCA CACGCCGGGC CAGAGGCAGT TTGCGAGCGT GGACCAGTTC
CGCTCCTATT ACATGAAGAA GAGCGGAATC ACGGCCGAGG AGATGGATGT GATCGTGGCC
ACGCGGCTCG ATTTCCACGA GCGCTTCGCG CGGGAGAACC GCGCCGGGCT GGTGGCGCTG
GCCCATGCCC ACGGTTGCGT GGTGGCAAGC CACGACGACG GCACCCCCGA GCATGTGGCG
GAGGCCATCG GCGACGGCGT GGCGGTGGCC GAATTCCCCA CCACGGAAGA GGCGGCCAGG
CTCTCCCATG ACGCCGGCAT CCGCGTGCTC ATGGGCGCGC CCAACCTGGT GCGCGGCGGC
TCCCACACCG GCAATGTCTC CGCCGAGGCG CTGGCCCGCG CCGGGCTGCT GGACATCCTG
TCGTCGGACT ATGTGCCCTC CTCCCTCCTG TGGTCCGCCT TCGACCTCAA CCGCCGGGCG
CCCTCCATCG ACCTGCCGCG GGCGGTGCGC ATGGTGACGA AGACCCCGGC CGAGGTGGCG
GGCCTCACCG ATCGGGGCGA GATCGCCCAG GGCCGGCGCG CCGACCTGGT GCGGGTGACG
CTGGCCGGCG ACATGCCGGT GGTCCGGGCC GTTTATCGCG CGGGGCAAAG GGTGGCATGA
|
|---|
| Protein sequence | MTEQVFANAR LVLADEIVTG HLTVRDGRIH AIGTGAAPQC AQDLEGDFLL PGLVELHTDH
VEGHLAPRPK VRWNPLAAVL AHDAQIAASG ITTVFDSLRV WPDKKAVGMD GDAPVLIRAL
KEARAAGVLR ADHLIHLRCE VPTDTVVEDA AAILETTDVH LISLMDHTPG QRQFASVDQF
RSYYMKKSGI TAEEMDVIVA TRLDFHERFA RENRAGLVAL AHAHGCVVAS HDDGTPEHVA
EAIGDGVAVA EFPTTEEAAR LSHDAGIRVL MGAPNLVRGG SHTGNVSAEA LARAGLLDIL
SSDYVPSSLL WSAFDLNRRA PSIDLPRAVR MVTKTPAEVA GLTDRGEIAQ GRRADLVRVT
LAGDMPVVRA VYRAGQRVA
|
|---|
| |