Gene Xaut_1279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_1279 
Symbol 
ID5423178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1472259 
End bp1473179 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content71% 
IMG OID640880527 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_001416185 
Protein GI154245227 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.665979 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGTG CTCAGTCACA CGCGACGGAA CCTCAGGACG CCGCACGCCA CGCCTCGGGA 
CGCGACAGCC TCGGCTGCGC GCTGGATGCG CTCTGCGAGG GTCAGGAACT AAGCGGTAAC
GGCTTCGTGA TCTACCGCAA GTCCCATGAC GGCAGCGAAC TGCGGCAGGT GGAAACACCG
CCGAGCGACC GGGGCGTGCT GGTCGGTCTG TCCCTCTCGG GCGGCCACCG GCGGCGCATC
TTCACCGGCA ACCGCTCGGC CACTTACGAT TTCGCGGCGG ACAGCTGCTA CATCCGCCCG
TTCGCCGACG ACTACCGGGC CGACATCGAG ACCGGGTTCG AATTCCTGCT GCTGGAGGTC
TCCCAGGCGG CGCTCCACCG CACCTGCGCC GAAAGCGGCG TGGCGCTCGC CGACGCGCTT
TCCACCACGC CCGGGGCGAG CGACCCGGTG CTCGCCCATC TCGGCCGGGC CCTGTTGCCG
GCCCTCGCCC ATGCGGCGAG CGCCAGCGCG CTGTTCGTGG AGCAGGTGGT GTGCGCCATG
CAGACGCATC TGGTCGCCCG CTATCACGGC GCTACCGCGC GGGCCGCGCG GGGTGGCGGC
CTGTCCGACC TGCAGCTGCG GCGCGCCCAG GAACTTCTGG CGGCGGGCAT GGACGGCACG
GTGCTGATCG CCGACATTGC CGCCGCCTGC AACGTGTCGC GCAGCTATTT TATCCGCGCC
TTCCGGCAGG CCACGGGCGC GACGCCCTAC CAGTGGCTGC TCGCCCGGCG GGTGGAGCAG
GCCCGCGCGC TGCTCACCCG ATCGGCCATG CCCCTGGCGG ACGTGGCCAT CCAGTGCGGC
TTTTCCGACC AGAGCCACAT GACGCGCACC TTCGCCCGCC TCACCGGATC GACGCCCGGA
GCCTGGCGGC GCAGCCGCTG A
 
Protein sequence
MNGAQSHATE PQDAARHASG RDSLGCALDA LCEGQELSGN GFVIYRKSHD GSELRQVETP 
PSDRGVLVGL SLSGGHRRRI FTGNRSATYD FAADSCYIRP FADDYRADIE TGFEFLLLEV
SQAALHRTCA ESGVALADAL STTPGASDPV LAHLGRALLP ALAHAASASA LFVEQVVCAM
QTHLVARYHG ATARAARGGG LSDLQLRRAQ ELLAAGMDGT VLIADIAAAC NVSRSYFIRA
FRQATGATPY QWLLARRVEQ ARALLTRSAM PLADVAIQCG FSDQSHMTRT FARLTGSTPG
AWRRSR