| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1241 |
|---|
| Symbol | |
|---|
| ID | 5423531 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 1429038 |
|---|
| End bp | 1430453 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640880489 |
|---|
| Product | amino acid carrier protein |
|---|
| Protein accession | YP_001416147 |
|---|
| Protein GI | 154245189 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1115] Na+/alanine symporter |
|---|
| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.912525 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGCAC TGATCGACGT CCTGAACACA ATTTTCTGGG GCTATGTCCT CATCTACGGC
CTGCTGGCGG TGGGCGTGTA TTTCACCTTC CGCCTGCGCC TTATCCAGAT CCTGCATTTT
CCGGAGATGT TGCGCTCCGT GCTGCGGGCG GATGCCACCG ACAAGTCCGG TATCACGCCG
TTTCAGGCCC TGTGCACCTC GCTTGCCTCG CGCGTGGGCA CGGGCAACAT CGCCGGCGTC
GCCGTGGCGC TCACCCTCGG CGGGCCGGGC GCCATTTTCT GGATGTGGGT GGTGGCCGCC
CTCGGCATGG CGACCGCCTT CGCCGAAAGC ACGCTGGCCC AGCTCTACAA GGTGAAGGAC
GATGAGGGCC GCTATCGCGG CGGGCCGGCC TTCTATATCG CGCGCGGCCT GAAGGCGCCG
TGGGCCGGCG GTGTGTTCTC GGTCTGCCTC ATCCTCTCCT TCGGCCTGGT CTTCAACGCC
GTGCAGGCCA ATTCCATCGC CGATGCCATG CACGGCGCCT TTGAAATCCC CAAGCTCTGG
ACCGGCCTGG CCGTCGCCGC GCTCTCGGGA ATCATCATCT TCGGCGGCAT CGCCGCCATC
GCGCGCACCG CAGAGCTGGT GGTGCCGTTC ATGGCGCTCG CCTATGTGGC CCTCGCGCTC
TATGCGCTCG TGACCCATCT CGGCGCGGTG CCGGCCATGC TCGGCCATAT CGTCGGCAGC
GCCTTTGGCC TTGAGCCGGC GGCAGGCGGC GTTTCGGGGG CGGTGGCCGC GGCCATGCTC
AACGGGGTGA AGCGCGGCCT GTTCTCCAAC GAGGCCGGCA TGGGCAGCGC GCCCAATATC
GCCGCCGTGG CGACGCCCGA TCCGCATCAC CCCGTGAGCC AGGGCTTCGT GCAGTCCCTG
GGGGTGTTCA TCGACACCAT CGTGATCTGC ACCGCCACCG CGCTGCTGAT CCTGCTGTCG
GGCGTGGAGC TGGGGTCGGC CACCGGAACG CAGCTCACCC AGGCGGCGCT GGAAGCCCAT
GTGGGTTGGC TCGGGCGCTA TTTCGTGGCC ATCGCCATCT TCTTCTTCGC CTTCACCTCC
ATCATCGGCA ACTACTCCTA TGCGGAGAAT GCACTGGTGT TCCTCGGCCA CGGTCATGTG
TCCGGGGTGG TGCTCCTGCG CATCGGCGTG CTCGCCATGG TGGTGTGGGG CGCGGTGCAG
AGCGTCGCCA CCGTGTTCAA TGCGGCCGAC GCCTCCATGG GGCTCATGGC CTCCATCAAT
CTGGTGGCCA TCGTGCTGCT GTCGGGCACG GTGGTGCGGC TAGCGCAGGA TTATCTCGTC
AAGCGCAAGG CCGGTGTGGA GCCGGTCTTC ATCGCCACCG ACATGCCGGA CCTGCCGCCA
GGCGTGGACG GGGAAATCTG GAAGCGCCGG GGCTGA
|
|---|
| Protein sequence | MDALIDVLNT IFWGYVLIYG LLAVGVYFTF RLRLIQILHF PEMLRSVLRA DATDKSGITP
FQALCTSLAS RVGTGNIAGV AVALTLGGPG AIFWMWVVAA LGMATAFAES TLAQLYKVKD
DEGRYRGGPA FYIARGLKAP WAGGVFSVCL ILSFGLVFNA VQANSIADAM HGAFEIPKLW
TGLAVAALSG IIIFGGIAAI ARTAELVVPF MALAYVALAL YALVTHLGAV PAMLGHIVGS
AFGLEPAAGG VSGAVAAAML NGVKRGLFSN EAGMGSAPNI AAVATPDPHH PVSQGFVQSL
GVFIDTIVIC TATALLILLS GVELGSATGT QLTQAALEAH VGWLGRYFVA IAIFFFAFTS
IIGNYSYAEN ALVFLGHGHV SGVVLLRIGV LAMVVWGAVQ SVATVFNAAD ASMGLMASIN
LVAIVLLSGT VVRLAQDYLV KRKAGVEPVF IATDMPDLPP GVDGEIWKRR G
|
|---|
| |