| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1142 |
|---|
| Symbol | |
|---|
| ID | 5421556 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 1313774 |
|---|
| End bp | 1314550 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640880390 |
|---|
| Product | trans-aconitate 2-methyltransferase |
|---|
| Protein accession | YP_001416048 |
|---|
| Protein GI | 154245090 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4106] Trans-aconitate methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCG ACTGGAATGC CCGCCAGTAT CTGAAATTCG AGGACGAGCG CACCCGTCCG
TCCCGCGATC TGCTGGCACA GGTGCCGTTG CCGGACGCCG GCTTCGTGGT GGATCTCGGC
TGCGGCCCCG GCAATTCCAC CCAGCTTTTG GCGGAGCGCT TTCCCGGCGC CGAAGTGCTG
GGGCTCGACA CCTCGCCGGA CATGCTGGCG GCCGCCCGCG CGCGCCTGCC CAACGCCCGC
TTTGAGGCGG GCGACGCCTC CACGTTCACG CTCGACAAGC CGGCGGACCT CATCTTCGCC
AATGCGGTGC TGCAATGGGT GCCCGACCAC GCCACCCTGC TGCCGCGGCT CATGACCCTG
CTGGCGCCGG GCGGCGTGCT GGCGGTGCAG ATGCCGGACA ATCTCGACGA GCCGTCCCAT
GTGGCGATGC GGGAGAGCGC CATGTCCGGC CCCTGGGCCG ACAAGCTGTC GGAGGCCTCC
CGCGCCCGCG CCGTGCTGCC GGAGCCCGGC GGCTATTACG ACATGCTGGC GCCCCACGCG
GCGCGGGTGG ACATCTGGCA CACCATCTAC AACCACCCGC TGGACGGGGT TTCAGCCATC
GTGGAGTGGC TGAAGAGCAC AGGCCTGCGC CCCTTCCTCG ATCCGCTTGA GGGCGACGAG
CGCGCCGAGT TTCTCGAGGA CTATGCCGCC CGCCTTTCCG ACTGCTATCG GCCGCGGGTG
GACGGCAAGG TGCTGCTGGC CTTCCCGCGC CTGTTCCTGC TGGCGGTGAA GAAATAA
|
|---|
| Protein sequence | MAADWNARQY LKFEDERTRP SRDLLAQVPL PDAGFVVDLG CGPGNSTQLL AERFPGAEVL
GLDTSPDMLA AARARLPNAR FEAGDASTFT LDKPADLIFA NAVLQWVPDH ATLLPRLMTL
LAPGGVLAVQ MPDNLDEPSH VAMRESAMSG PWADKLSEAS RARAVLPEPG GYYDMLAPHA
ARVDIWHTIY NHPLDGVSAI VEWLKSTGLR PFLDPLEGDE RAEFLEDYAA RLSDCYRPRV
DGKVLLAFPR LFLLAVKK
|
|---|
| |