| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_1057 |
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| Symbol | |
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| ID | 5425042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 1211503 |
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| End bp | 1212624 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640880303 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001415964 |
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| Protein GI | 154245006 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.347653 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAC GGATGATCCT CATGCTGGCC GCCGTCGCCC TGGTTTTCGG GGCGCTATAC
GGCTTCCAGC TCTTCAAGGC GAGCATGATC AAGCAGGCGC TGGCCTCGCT GCGCGACCCG
CCGCAGACCG TCGCGACCAC GGTGGCTGGC CTCACGCCCT GGCAGTCCAC CGTCAAGGCG
GTGGGCAGCG TGCGCGCCGA AGCGGGGGCA GACTTGGCGC TCGAGAGCTC CGGCACGGTC
GCGAAGATCA ATTTCAAGTC TGGTGACGAG GTGCGCGAGG GGCAGGTCCT CCTTCAACTG
CGCGACGAGC AGGAGGTGGC CAATCTCGCC GCCCTGAAGG CGACTGCGGA CGTCAGCGCC
ATCATCCTCA ACCGCGACCA GGAGCAGTTG AAGATCCACG CGGTGAGCCA GGCAACCATC
GACAGCGACA CCGCAAACCT CAAGAAGGCG CTGGCCCAGG TGGCCGAGCA GCAGGCGGTG
GTGGACAAGA AGACGCTGAA GGCGCCCTTT TCCGGCCGGC TCGGCATCCG CTCCGTCGAT
CTCGGCCAGT ATGTGAGCGC GGGCACGGCG GTGGTGACGC TCCAGTCCCT CAACCCCATC
TTCATCGACT TCTACCTGCC GCAACAGGCC CTCGCCGAGG TGAAGACGGG CCAGACGGTG
AAGGCCACGG TGGACACCTA TCCCGGCCAG GCCTTCGAGG GGACGGTGAC GGCCATCAGC
CCCAAGGTGG ACGTCACCTC GCGCAACGTG CAACTGCGCG CCGAGTTCAG GAACGACGAT
CACCGCCTCA CCCCCGGCAT GTTCGCCACT GTCGAGGTCG CTGTGGGAAC GCCGGACGCG
TTCGTTACCG TGCCGCAGAC GGCCGTGACG GCCAATCCGT ATGGCGACAT CGTTTTCGTG
GTGGAGAAGA AGGAGGGCTC GGCCACAGGC CTCGCCGCGC GTCAGGTCTT CGTGAAGACG
GGCGCGACGC GGGGCGACCA GATCGCCGTC CTATCAGGCA TCAAGGAGGG CGACCAGATC
GTCGCCGCCG GGCAGATGAA GCTGCACAAC GGGTCCCAGG TCAGCGTCAA CAATACGGTG
CTGCCGGCCA ACGACCCCGC TCCCTCCATC GTCGATCGCT GA
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| Protein sequence | MKKRMILMLA AVALVFGALY GFQLFKASMI KQALASLRDP PQTVATTVAG LTPWQSTVKA
VGSVRAEAGA DLALESSGTV AKINFKSGDE VREGQVLLQL RDEQEVANLA ALKATADVSA
IILNRDQEQL KIHAVSQATI DSDTANLKKA LAQVAEQQAV VDKKTLKAPF SGRLGIRSVD
LGQYVSAGTA VVTLQSLNPI FIDFYLPQQA LAEVKTGQTV KATVDTYPGQ AFEGTVTAIS
PKVDVTSRNV QLRAEFRNDD HRLTPGMFAT VEVAVGTPDA FVTVPQTAVT ANPYGDIVFV
VEKKEGSATG LAARQVFVKT GATRGDQIAV LSGIKEGDQI VAAGQMKLHN GSQVSVNNTV
LPANDPAPSI VDR
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