Gene Xaut_0930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0930 
Symbol 
ID5423584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp1049131 
End bp1050477 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content66% 
IMG OID640880177 
Productmajor facilitator transporter 
Protein accessionYP_001415838 
Protein GI154244880 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCACG CCACCTATCC CATTTCAGGA CACACCGCGC CCGGCCTCAA CAAAGGACAA 
TGGCGCATCA TCTTCCTTGC GAGCCTCGGC GGCTCCCTTG AGTTCTACGA CTTCATTATT
TACGGCATCT TTGTCCAGTA CATCTCGGCA CAGTTCTTTC CGGCCGACGA CCCCTATGTC
TCCCTGATCC TGTCCTTCTC GGTGCTGGCC CTCGGCTTCC TGGCACGGCC GTTCGGTGGC
GCGCTGCTCG GCACGCTGGG TGATCGGTAT GGACGCAGGC CGGTCTTCAT CGCCTCCCTT
GGCCTGACCA CGCTTGCAAC CATCGCCATC GGCCTCCTTC CCAACTACCA GTCATGGGGC
ATCGCCGCGC CGGTGCTGCT GGTGGCCTTC CGTCTCGTGC AGGGCATCTG CCTCGGCGGC
GAGCTGCCGG GTGCGGTCAC CTATGCGGTG GAGGCAGCGC CACGGCGCGC CGGCCTCGCG
TGCGGTTTCA TCATCTTCTG CGTCAATGTC GGCGTGCTCA TCGCCACCCT CGTCAACCTC
GGCATCCAGC ATGCGCTTCC GCCTCAGGAC GTTGCCGAAT ACGGCTGGCG CATCGCCTTC
CTGCTCGGCG GCGTCATCGG CCTGATCAGC TTTGCCCTGC GCCGCAAGCT GGAGGAATCG
CCCGAGTTCG TGAACCTCCA CGACAAGGCT GCGAGGCATC CGCTGGGAGA ACTGATGCGC
AATCACGGCC GTTCGGTGCT GGTCGCGGCC GGTGTCGCCG CCATCATCGC CGGCTTCAAC
GGCATGCTCT ACGGCTTCGT GCCCGCCTTC CTGGTGAAGA CGCTGCACTA TCCGGCCCCC
GATGTGGCGC TGGCCATGAC GGTCGCGCTG GTGGTCAGCT CCGCCGGCCT CATCATTGCG
GGATGGGCCG GCGATTTCGT GCCCGGACGC CTCATCCTGC GCGCCGGTTC GCTGACCATG
CTCATCGTGG TGGTTCCGCT GTTCGCGCTC ATGGCGAACC ACGCGATCAG CATCGTGCTG
GTGCTGAGCC TGCTGTCGCT GGTGTTCTCT CTGGCGAGCG GCATCTGGCC CAGCATCCTC
GCCGGCCTGT TCCCGACCCA GGTCCGCTTC ACCGGCCTTG CCCTGTCATA CAACATGAGC
GTCACCCTCC TCTCGGGCTT CGCGCCGCTC GCCGCGACGA TACTCATCGA GCAGACGCGG
ATGGACGCAG CGCCGGCGCT CTACATCGCC CTGTGCGCGG CCCTGAGCTT CTGGTGCAGC
TTCCTCGTCC CCGGACGGGC ACGCGCGGCG GCGGTTCCGG AAGCCACGCG GGCAAGCCTC
GATGCCTCGG ACATGCCACC GGCCTGA
 
Protein sequence
MTHATYPISG HTAPGLNKGQ WRIIFLASLG GSLEFYDFII YGIFVQYISA QFFPADDPYV 
SLILSFSVLA LGFLARPFGG ALLGTLGDRY GRRPVFIASL GLTTLATIAI GLLPNYQSWG
IAAPVLLVAF RLVQGICLGG ELPGAVTYAV EAAPRRAGLA CGFIIFCVNV GVLIATLVNL
GIQHALPPQD VAEYGWRIAF LLGGVIGLIS FALRRKLEES PEFVNLHDKA ARHPLGELMR
NHGRSVLVAA GVAAIIAGFN GMLYGFVPAF LVKTLHYPAP DVALAMTVAL VVSSAGLIIA
GWAGDFVPGR LILRAGSLTM LIVVVPLFAL MANHAISIVL VLSLLSLVFS LASGIWPSIL
AGLFPTQVRF TGLALSYNMS VTLLSGFAPL AATILIEQTR MDAAPALYIA LCAALSFWCS
FLVPGRARAA AVPEATRASL DASDMPPA