Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0895 |
Symbol | |
ID | 5421607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 998122 |
End bp | 999039 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 640880137 |
Product | PaaX family transcriptional regulator |
Protein accession | YP_001415803 |
Protein GI | 154244845 |
COG category | [K] Transcription |
COG ID | [COG3327] Phenylacetic acid-responsive transcriptional repressor |
TIGRFAM ID | [TIGR02277] phenylacetic acid degradation operon negative regulatory protein PaaX |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.947925 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCTCGG CCGGGGTTTC CGCTTCCGCT TATCTCGCGC TATGGAACGC CATGTCGCGC CGCGCCCTCG ATCTCATCCT CGACCATGTC CGCGCCGAGC CCTCGCGCAC CTGGTCCATC ATCGTCACCA TCTATGGCGA TGCCATCGTG CCGCGCGGCG GCTCGGTGTG GCTCGGCACC CTGCTTGCCT TCTTCAAGGG GCTGGATATC GCCGACGGGG TGGTGCGCAC CGCCATGTCG CGCCTCGCCG CCGACGGCTG GCTGACGCGC ACCCGCATCG GCCGCAACAG CTTCTATGGT CTCGCCGACA AGGGTCGCGA GACCTTCGCC CGCGCCACCG AGCACATCTA CAGCCACCGC CCGCCGGAAT GGCGCGGCCA CTTCCAGATG CTGCTCATCG AGCCCGCCGC GCGGGAAGGC GCGCGCGCCG CGCTGGATGC GGCCGGCTAT GGGGTTCCCC TGCCGGGCGT CTTCATCGCG CCGGCAGGCG CCGAGGTGCC GGAGGAGGCG CTGGCCGCCC TGCGGCTTGA GGTTTCGGGC ACGCCGGAGG CCCAGCAGGA ACTGGCGGGC CGCGCCTGGC GGCTGGAGGA GACGGCGCAG GCGTATGTGA GCTTCATGGA GGTGTTCGCG CCCCTGCGCG CGGCGCTGGC GGCGGGGGAA ACCCTCACCG ACCTTGAGGC CATGGTGGCA CGGGTGCTGC TCATCCATGA ATATCGCCGC ATCGTGCTGC GCGATCCCAT CCTGCCGGCC GCTATCCTGC CCGCCGACTG GCCCGGCCCG GCGGCCCGTG CCCTGTGCGC CGACATCTAT GCCCATGTGA TCGCCGCGTC CGAGCGCTGG CTCGATGACA ACGCCGTGGG CGAGGACGGC GATCCGCTGC CGGCCAGCGC TAAAATCGGG CGTCGTTTCA AGGACTAA
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Protein sequence | MVSAGVSASA YLALWNAMSR RALDLILDHV RAEPSRTWSI IVTIYGDAIV PRGGSVWLGT LLAFFKGLDI ADGVVRTAMS RLAADGWLTR TRIGRNSFYG LADKGRETFA RATEHIYSHR PPEWRGHFQM LLIEPAAREG ARAALDAAGY GVPLPGVFIA PAGAEVPEEA LAALRLEVSG TPEAQQELAG RAWRLEETAQ AYVSFMEVFA PLRAALAAGE TLTDLEAMVA RVLLIHEYRR IVLRDPILPA AILPADWPGP AARALCADIY AHVIAASERW LDDNAVGEDG DPLPASAKIG RRFKD
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