| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0844 |
|---|
| Symbol | |
|---|
| ID | 5421766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 940692 |
|---|
| End bp | 942509 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 640880086 |
|---|
| Product | lipid ABC transporter ATPase/inner membrane protein |
|---|
| Protein accession | YP_001415752 |
|---|
| Protein GI | 154244794 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCATGCTT TGACACAAGC CGACACCTCA ACTGCCCCCA ACAACGACGC CTCCGAGGGC
TCCCGGCGCC GCAAGGCCAA CCTGAAGCCG CTGCGAGGCC TTGCCCCCTA CCTGTCGCGC
TATCGCGGCC GGGTCGCGGC GGCGCTGGTC GCCATCCTGG TGGCGGCGCT GGCGACGCTG
GCGCTGCCGC TGGCGGTGCG GCGCATGATC GATTTCGGCT TCGCGGCCGA CCATGCGGCC
CTGGTGGATC GCTATTTCGC GGTGCTGGTG GCGGTGGCGG CGGTGCTCGC CGCCGCCTCC
GCCGCCCGCT ACTACCTTGT GACCACGCTC GGCGAGCGGG TGGTGTCGGA CCTGCGCACC
GCCGTCTTCG CCCGCCTGGT GACGCTGGAC GGCGCCTTCT ACGACACCGC CCGCTCCGGC
GAGCTGACCT CGCGCCTTAC GGCGGACACC ACCCAGCTGA AGTCGGCGGT GGGCGCCTCG
GCCTCCACCG CCTTGCGCAA CCTGGTGCTG TGCGTGGGCG GCATCGCCAT GATGGTGGTG
ACCAGCCCGC GCCTGTCGGC CCTGGTGCTG GTGGCCATCC CGGTCATCGT ACTGCCGTTG
GTGGCGTCCG GCCGCAAGGT GCGCCGGCGC ACCCGCCATG CCCAGGACAC GCTGGCCGAC
GCCTCGGCCT ATGCCGCCGA GGCCCTCAAC GGCATGCGCG CGCTGCAATC CTCCAGCGCG
GAAGGCGCTG CGCGGGCGCG CTTCGACGGG GCGGTGGAAG AGGCCTTCAC CGCCGCACAG
GACGCGACGC GGGCGCGGGC CTGGCTCACC GGCGTCGCCA TCTTCCTCGT CACCGCCAGC
ATCGTGGCGG TGCTGTGGGC GGGCGCCCAA TCGGTGCTCG GCGGTACCAT GAGCTCGGGG
GCGCTGAGCC AGTTCGTGCT CTATGCGGTG CTGGCCGCCG CCTCGCTGGG CAATCTGTCC
GAGACCTGGG GCGAGGTTTC CGCCGCGGCC GGCGCCGCCG AGCGCATCGG TGAACTGCTG
AAGGTGGAGC CCCAGGTGCG CACCCCGGCC CAGCCAGTTG CGCTGCCGGC GCGTCTTTCC
GGCGCCATAA GGTTCGACGA GGTGTCCTTC GCCTATCCCA CGCGGGCCGA CGACAATGCC
CTGCATGCCG TCTCCTTTAC CGTGCGGCCC GGCGAGCGGG TGGCGCTGGT GGGGCCGTCG
GGGGCGGGCA AGAGCACGGT GTTCCAGCTG CTGGAGCGCT TCTACGATCC GCAGGCGGGG
CGCATCCTGC TGGACGAGAT CGACATCGGC ACCGCCGATC CGGTGGACGT GCGCCGGCAG
ATCGCGCTGG TGCCGCAGGA GGTCGCCATC TTTGCCGACA CCGTGCGCGC CAACATCCGC
CTGGGCCGGC CCGACGCCAC CGACGCCGAG GTTGAGGCCG CAGGCCAGGC GGCGGCGGTG
GACGAGTTCG TGGCGCGCCT GCCGCAGGGC TGGGACACGC TGGTGGGCGA ACGCGGGGTG
ACCCTCTCCG GCGGCCAGCG CCAGCGCATC GTCATCGCCC GCGCTATCCT GCGGGCCGCC
CCCATCCTGT TGCTCGACGA GGCCACCAGC GCGCTCGATG CGGAAAGCGA GACCCTGGTG
CAGACCGCGC TCGAGCGCTC CATGGAGGGG CGCACCACGC TCGTCATCGC CCACCGCCTC
GCCACCGTGC TGGAAGCCGA CCGGATCCTG GTGATGGAGG CCGGCCGCGT GGTGGACGAG
GGCACCCACG CCGAACTGGT GGCCAAGGGC GGCCTCTACG CCCGCCTCGC CCAGCTCCAG
TTCAACGCGG CGGCTTAA
|
|---|
| Protein sequence | MHALTQADTS TAPNNDASEG SRRRKANLKP LRGLAPYLSR YRGRVAAALV AILVAALATL
ALPLAVRRMI DFGFAADHAA LVDRYFAVLV AVAAVLAAAS AARYYLVTTL GERVVSDLRT
AVFARLVTLD GAFYDTARSG ELTSRLTADT TQLKSAVGAS ASTALRNLVL CVGGIAMMVV
TSPRLSALVL VAIPVIVLPL VASGRKVRRR TRHAQDTLAD ASAYAAEALN GMRALQSSSA
EGAARARFDG AVEEAFTAAQ DATRARAWLT GVAIFLVTAS IVAVLWAGAQ SVLGGTMSSG
ALSQFVLYAV LAAASLGNLS ETWGEVSAAA GAAERIGELL KVEPQVRTPA QPVALPARLS
GAIRFDEVSF AYPTRADDNA LHAVSFTVRP GERVALVGPS GAGKSTVFQL LERFYDPQAG
RILLDEIDIG TADPVDVRRQ IALVPQEVAI FADTVRANIR LGRPDATDAE VEAAGQAAAV
DEFVARLPQG WDTLVGERGV TLSGGQRQRI VIARAILRAA PILLLDEATS ALDAESETLV
QTALERSMEG RTTLVIAHRL ATVLEADRIL VMEAGRVVDE GTHAELVAKG GLYARLAQLQ
FNAAA
|
|---|
| |