Gene Xaut_0782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0782 
Symbol 
ID5421470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp870194 
End bp873517 
Gene Length3324 bp 
Protein Length1107 aa 
Translation table11 
GC content68% 
IMG OID640880024 
ProductUvrD/REP helicase 
Protein accessionYP_001415690 
Protein GI154244732 
COG category[L] Replication, recombination and repair 
COG ID[COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.685172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.12668 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGC TCGCCGACGA AGCCGCGCGC CTCAGGGCGC TCACAGAACT GCATCTGACG 
CTGCTGGTGG AGGCGGCGGC GGGCACCGGC AAGACCGCTC TTATGGCCGG CCGCGTGACG
ATGTTGTTGA TGAGCGGCGC CGAGCCGCGC TCGATCGCCG CCATCACCTT CACGGAGCTC
GCGGCGAGCG CGCTCGGCGC GCGCGTCCAC CGCTACGTCG ACGATCTGCT CGCGGGACGT
GTTCCGAAAC CGCTGCGGGA GGCTCTGCCC GACGGGCTGA CCGACGCGCA GCGGCGCATC
CTTTCCGAGG CTGCGGGCAA GCTCGATGAG CTGACCGCCA CGACCATCCA CGCGTTTTGC
CAGACCATCA TCTGCAGCTA CGCAGTCGAA GCCGATATCG ACCCTGGCGC GCGCATCCTC
GATGCGGCGC AGGCCGAAGC CGCGTTCGAG GCCGTGTTCG AGCAATGGTT CAGAAGGCGG
CTGAATGGAC CGGCGCGGGC CGACGATCCG ATCGCCTCCT TGTCGCAGTA CGATCCGCAT
CACGTGGCCG CCACCTTGCG AAACCTTGCG CGGTTTCGCC TGGAGCATCG GGGCGCGCGG
GCGCCCGCGG CCGATCTCAG CGGCCGGCCG GACATCGACC TCGTCGAGGC CGTCGCGGAT
TTCCGCCGCT GGCTTTCGGC GCAGCCTCTC GAGCCCAAGA CGCTCGAACT GGTCGGACAG
CTCGAGACGC TGGCCGATCA CTTCGCCGGC AGCTTCGCGA CGGCGCCTGT CTTCGACACG
CTCTGGCGGC TCGCTCATCC GGCGCGCCTG CCTTGCATGC GGCGCTATAC ATTCGATCTG
CTGACTCCAA GGACGAAAAC GGCGTGGGAC AAGGCCGCCG GCAAGGATCG CGGCGCCGAA
CTTAACGCCG AGGCTGGTCG GCATTTTGCG CGGGTGGATC ACTGCTACCG CGTGATCCTT
GGCCGTGTCG CGACCGCGCT GGTCGCCAAG TTGTCCGATG AACTCGATGA GGTTCTTGCC
GACTACGCCG CCTTCAAACG CGCTGCCGCC GTTCTCGACT TCGACGATCT GCTGGAGCGG
GCGCGCGCGC TCGTGCGCGG GCATGATGCG GTCCGCCGCG CGCTCGGGCA GCGCTATAGC
CACATCTTCG TCGACGAATT CCAGGATACC GACCCGATCC AGGCGGAAAT CCTGTTTCGC
ATCGCCGCCG ACGACAGCCC GCCGCGCTGG CAGGACAGCC GTCTGCGCGC TGGCGCTCTC
TTCATGGTCG GCGATCCCAA GCAGGCGATC TACCGCTTCC GGGGCGCCGA CGTCGGCTCC
TACGCGGAGG CGCGGAGCGC CATCGCCCGG CGCTGGCCCA ACAACATCGT CCAGATTACG
GCGAACTTTC GCTCACGGCC GGCGATCCTG AGCCACATCA ACCGCTGTTT CGCTACGCCG
CTGTCGGCCC AAAATCAGCC GGGCTACGTG GAGCTCGCGC CAACGCTGGA TCCGCCGGAT
CACGATCTGC CATGCGCCGC CAAGATCACG ATCGATCTGC CGCCGGATTC GCGGGCGGCG
CAGATCCGCG ACGCCGAAGC CGAAGTCGTC GCCGATCTGT GCGCGCGGCT GATCGGCAAC
GTGACGATCC GCGATGAAGA CGGCGACCTT GCGCCGCTCA CGCCGGGCGG CATCGCGCTG
CTCGCCCCGA CGGGCTCGGA GCTTTGGCGT TACGAGCGCG CGTTTGAAGC CCGCGGCCTC
CGGATCGCCT CCCAGGCCGG GAAAGGACTG TTCCGCCGCC AGGAGGTGCA GGACCTCGTC
GCGCTCGTGC GCGTGCTGGC CGACGGCGGT GACACCTTGG CGTTCGGCGC CTTGATGCGC
GGCCCGCTCG TGGGCCTCAG CGAGGAGGAG TTGCTCGACA TCACCGCGGG ATTGCCGCCG
CTTGCGGATC GGCCCGAAGC AATCCCTCGG TTTTCGCTCG CGACGGATGC CGATGACGTC
GCTCATCCCG TCGCGCGGCG GGTCCTCACG ATCCTTCAGG ACCTGCGCCG CCGGGCGCGC
GCCACGACAC CCGCGCTGCT GCTCGCCGAA GCCGTCGAGC GGTTGGCCGT GCGGCCGATC
CTGAGCGCGC GCGAAGGCGA CCGCAGCGCG CGAGCCGCCG CCAACGTCGA GGCGCTGCTC
GAACGGGCGC GGCCCTACGG CGTCAAAGGC ATGAAGCGCT TCGCCCGCGA CGTGAGCCGC
GATTGGCGCG GCGGCGCCGC CTACAACGAA GGCCGCGTAG ATGCCGATGG AGACGCCATC
GAGATCATCA CCATCCACAG CGCCAAGGGG CTCGAATGGC CGGTGGTGAT CCCGATCAAC
ACCGCGACCT TGCTGCGCTC CCGCGAGCCG TTTGTGCACC GGGCTGACGA CGACACGCTG
CATTGGGTGA TCGGCGACGT CGTGCCGCCC GAGCTGCGCG CGGCGCTCGA GACCGATGAC
GAGAGCCTGA CGCGCGAACG CGAACGGCTC TGGTACGTGG CCTGTACGCG AGCCCGTGAG
CTGCTGATCG TGCCGGAATT GGCGCAGGCC GAGCAGAAGT CCTGGGCTCG CGTCGTCAAT
CTGGGCCACG ACGCGTTGCC GGAGCTGGAC ATCTCCCGCA TGACGCCGGC GCCGATGCCG
ATGAGCGCCG ATCCGCCGAA TACTCAGACC GCTGAGCTGT TCGCAGCCGA GCGCGCGACC
ATCGAAGAAG CGGCCGTTGC GCTGACCTGG GTCCGGCCGA GCGATCATGA TCCGGACCGC
CTGGAGGCGG TCGAGGCCAT CACACTCGAT GCCGGCGATG CGCCGGAGGT CGATCTGCCT
GTCGGCGCGG GACGTGTGCG CGGTCTTCTC CTGCACAAGC TGATGGAAGA GGTGCTGAGC
GGCGAGCTTG TCGAAGAGGT AGGCCGCTTT GTCAGCCGCG CCCGCGAATT GCTCACTGAA
CTGGTCCTCG ATCCCGACGA CAGCGAGGCG CTTCCGGACT CTGACGAGAT CGCGGCGACC
GCCTGGCGCA CGTTGCAACT GCCCGACATC GCCGCGCTTC GCGACCGGCT GACCCCCGAA
TGGCCGGTCT ATGCGCTGCT CGAGGATAGC TCGAAGCCAA GGGCGCTCGC CGGACGCATC
GACGCCATCG CCTACACCGG AGATCGCGCC GAGGTGGTCG TCGACTGGAA GAGCGACGTC
GATCCGTCCG ACGCGGATAT TCGCCTCCAT GCTGGTCAGC TCGAAGACTA TCTGCGGGCG
ACAGGCGCCC CACGCGGCGC GCTGGTCTAC ATGACGCCCG GGCTCGTGCG CTGGGTCGCC
GGGCGGGATG AGCGGCAATC GTGA
 
Protein sequence
MTKLADEAAR LRALTELHLT LLVEAAAGTG KTALMAGRVT MLLMSGAEPR SIAAITFTEL 
AASALGARVH RYVDDLLAGR VPKPLREALP DGLTDAQRRI LSEAAGKLDE LTATTIHAFC
QTIICSYAVE ADIDPGARIL DAAQAEAAFE AVFEQWFRRR LNGPARADDP IASLSQYDPH
HVAATLRNLA RFRLEHRGAR APAADLSGRP DIDLVEAVAD FRRWLSAQPL EPKTLELVGQ
LETLADHFAG SFATAPVFDT LWRLAHPARL PCMRRYTFDL LTPRTKTAWD KAAGKDRGAE
LNAEAGRHFA RVDHCYRVIL GRVATALVAK LSDELDEVLA DYAAFKRAAA VLDFDDLLER
ARALVRGHDA VRRALGQRYS HIFVDEFQDT DPIQAEILFR IAADDSPPRW QDSRLRAGAL
FMVGDPKQAI YRFRGADVGS YAEARSAIAR RWPNNIVQIT ANFRSRPAIL SHINRCFATP
LSAQNQPGYV ELAPTLDPPD HDLPCAAKIT IDLPPDSRAA QIRDAEAEVV ADLCARLIGN
VTIRDEDGDL APLTPGGIAL LAPTGSELWR YERAFEARGL RIASQAGKGL FRRQEVQDLV
ALVRVLADGG DTLAFGALMR GPLVGLSEEE LLDITAGLPP LADRPEAIPR FSLATDADDV
AHPVARRVLT ILQDLRRRAR ATTPALLLAE AVERLAVRPI LSAREGDRSA RAAANVEALL
ERARPYGVKG MKRFARDVSR DWRGGAAYNE GRVDADGDAI EIITIHSAKG LEWPVVIPIN
TATLLRSREP FVHRADDDTL HWVIGDVVPP ELRAALETDD ESLTRERERL WYVACTRARE
LLIVPELAQA EQKSWARVVN LGHDALPELD ISRMTPAPMP MSADPPNTQT AELFAAERAT
IEEAAVALTW VRPSDHDPDR LEAVEAITLD AGDAPEVDLP VGAGRVRGLL LHKLMEEVLS
GELVEEVGRF VSRARELLTE LVLDPDDSEA LPDSDEIAAT AWRTLQLPDI AALRDRLTPE
WPVYALLEDS SKPRALAGRI DAIAYTGDRA EVVVDWKSDV DPSDADIRLH AGQLEDYLRA
TGAPRGALVY MTPGLVRWVA GRDERQS