Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0514 |
Symbol | |
ID | 5424096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 572106 |
End bp | 575315 |
Gene Length | 3210 bp |
Protein Length | 1069 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640879761 |
Product | hydrophobe/amphiphile efflux-1 (HAE1) family protein |
Protein accession | YP_001415429 |
Protein GI | 154244471 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATATCGC GCTTTTTCAT CGAGCGGCCG GTCCTCTCGA ACGTACTCGC ACTTGTCTTC GTGCTGATCG GCCTGGTCTC GCTGACCCGG CTGCCGGTGT CGCAATATCC CAACATCGTG CCGCCCACGG TCTCGGTCTC GACCTCCTAT CCGGGCGCTT CCGCCAAGAC CATGATCGAC ACCGTCGCCC TGCCCATCGA GCAGCAGGTG AACGGCGTCG AGGGCATGCT TTACATGCAG TCCTGGTCGG CCTCCGACGG CACCTACACG CTGATCGTGA CCTTCGACAT CGGCGCCGAT CCCAACATGG CGCAGGTGCT GGTGCAGAAC CGCGTCAACA TCGCCCTCGC CTCGCTGCCC ACTGCGGTGC AGGCGCAGGG CGTCACCATC CTGCAGAAGG GCACCTCGAT CCTCGAGTTC GTCACCCTGA TCTCGCCGGA CGGGCGCTAT GACGGGCTGT TCCTCAACAA CTACGCCATC ATCAACATCC AGAACGAGCT GGAGCGTGTG GCCGGCGTCG CCAACGTGGG CATCTTCGGC GCCGGCACCT ACGCCCTGCG CATCTGGATG GACCCGGACC GCATGCAGGC CTTCGGCCTG ACGCCCCAGG ACATCTCCAA CGCCATCCAG AAGCAGAGCC AGATCGTCAC CCCCGGCCAG CTCGGCATTC CGCCGGCGCC GGACAATGCC GCTTTCCAAT ATACGGTGAA CATCGCTGGC CGCCTCGACG ACGCCAAGGA CTATGAGAAC ATCATCGTCA AGGTGGACAA TTCGGACGGT GGCCGCATCG TCCGCATCCG CGATATCGGC CGGGTGGAGC TGGGCGCGCA GAGCTATTCC AAGGATTTCA TGCAGGATAA CAAGCCTGCT GCCGGCATCG GCATCTTTCA GCTGCCCGCC GCCAACGCCC TCGACGTGGC GGCGCGGGTC TCCAAGAAAA TGGAGGAGCT GAAGAAGGAC TTCCCCGAAG GCCTCGAATA CAGCATCCCG TTCAACACCA CCCTGTTCGT GTCCGCCTCC ATCGACGAGG TCTGGAAGAC CCTGTTCGAG GCGGCGATCC TGGTGCTGGT GGTGATCCTG CTGTTCCTCC AGGATTGGCG GGCGACCCTG GTGCCGGCGA CCACCGTGCC GGTGACCATC ATCGGCGCGT TCGCGGCCAT GGACGCCATG GGCTTCACCA TCAACCTGTC CACGCTGTTC GCCATCATCC TGGCCATCGG CATCGTGGTG GACGACGCCA TCGTCATCGT GGAGGGCGTG GCCCGTCACA TCGAGGAGGG CATGGCGGGC CAGCCGGCGG CCGAGAAGGC CATGGACGAG CTGTTCGGCC CGGTGGTGGG CATCACGCTG GTGCTCATGA GCGTGTTCCT GCCGGCCTCC TTCATTCCCG GCCTGACCGG GCAGATGTTC AAGCAGTTCG CGCTGGTCAT CGCCGCCACG GCCTTCATCT CGGCCATCAA TGCGGCGACG CTGAAGCCCA CCCAGTGCGC CCTGTGGCTG CGTCAGCCGG TGCCGCCGGA AAAGCGCAAC TTCATCTTCC GCGGCTTCAA CAAGATCTAC GCCAAGGCGG AGCATGGCTA TACGGGCGTC ATCTCCCGCA TGGTGCACCA CTCCAAGGTC ATGGTGATCA TCGCCCTGGC GCTCATGGGC GTCGCCGCCT ACGGCCTCAC CCGCGTGCCC ACATCCTTCC TCCCGATCGA GGACCAGGGC TATTTCCTCG CCCACGTGCA ATTGCCGGAC GCCTCGAACC TCAACCGCAC CAAGAAGGTG ATGGCGGATG TCAGCGAGCG CATCCGCAAG GTGCCGGGGG TCGAGACCGT GCTGGCCATC TCCGGCATCT CGGTGCTGGA CAATTCATCC ACCCTCGCCA ACGCGGGCGT CACCTACATC ACCCTGAAGC CGTGGTCGGA GCGCTACGCC ACCACCGGAC AGGACCTGCT CTCGCTCTAC ATCAACCTCA ACAAGGCGGT GGCGGACGTG GTGCAGGCGG AGGTGCTGAT CCTGTTGCCG CCGGCCATCC AGGGCATCGG CAACGCCGCC GGCTTCACCA TGCAGCCGCA GCTGCGCAAC GGCAATTTCG ACTACCGCCT GCTGGAGCAG ATCACCACCT CCATGGTGGA CAAGGCGTCG GCCCAGTCCG CCCTGCAGCA CGTCTCCTCG TCTTTCCGTG CCGGGGCGCC GCAGATCGAG GTGGAGGTCA ACCGGGTCAA GGCGGAGACG CTGGGGGTCA CGGTGGGGCA GGTGTTCGAC ACCATCTCGT CCTATCTGGG CTCGACCTAC GTCAACCAGA TCAACAGGTT CGGCAACGTC TTCCAGGTCT ATGTGCAGGC CGAATCGGGT TATCGCGTCA CCCCGACCGA CCTCACCAAC CTGAAGGTGC GCACGCCCAA GGGGCAGATG ATCCCGCTCG GCACCCTCGT CACCGTGAAG ATGGTGCAGG GGCCGCCACT GATCTCGCTC TACAACCTGT ACCCCAGCTC CACCGTGGTG GGCGGCACCG CCCAGGGCTT CTCCTCGGGA CAGGCGCTCT CCCTGATGGA ACAGATCGCC TCCGCCACCC TGCCGCCGGG CACGGGCTTC GAATGGACCG CCATGTCCTA CCAGGAGAAG GCGGTCGGCA ATCAGATCTA CTACGTGTTC GGCCTCGCCA TCCTGCTCGT GTATTTCGTG CTGGCGGGCC AGTATGAGAG CTGGATCCAG CCCATGGCGG TGATCCTGGC GGTGCCTCTG GCACTGCTCG GCACGGTGGG GGCGCTGGTG GGCCTTGGCA TCTCCAACAA CCTCTACACC CAGATCGGCC TGGTGCTCCT GATCGCCCTT GCCTCCAAGA ACGCCATCCT CATCGTGGAA TATGCACGCG AGAAACGGGC GGAGGGGATG GAGATCATGG ATGCGGCGGT GGAGGCTTCG CGCCTCAGGT TCCGCCCCAT CCTCATGACC TCCTTCGCCT TCATCCTGGG CGTGCTGCCG CTGGTGTTCG CTACCGGCGC CGGTGCCAAT TCCCGCAAGT CCATCGGCAT CGCGGTGGTC TCGGGCATGC TGGCATCCAC CTGCCTCGCG GTGCTGTTCG TGCCGTCGTT CTATACGGTG CTGCAGCGGT TCGAGGAGAA GCTGAAGGGC AGGAAGAAGC CCGCGGGCCA TGCGCCCCCC GAGCCGCCGG AAAGCCCCGC GGCCGATGCC GGCGTGCCAC CGGCGCCCGC ATCTGCCTGA
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Protein sequence | MISRFFIERP VLSNVLALVF VLIGLVSLTR LPVSQYPNIV PPTVSVSTSY PGASAKTMID TVALPIEQQV NGVEGMLYMQ SWSASDGTYT LIVTFDIGAD PNMAQVLVQN RVNIALASLP TAVQAQGVTI LQKGTSILEF VTLISPDGRY DGLFLNNYAI INIQNELERV AGVANVGIFG AGTYALRIWM DPDRMQAFGL TPQDISNAIQ KQSQIVTPGQ LGIPPAPDNA AFQYTVNIAG RLDDAKDYEN IIVKVDNSDG GRIVRIRDIG RVELGAQSYS KDFMQDNKPA AGIGIFQLPA ANALDVAARV SKKMEELKKD FPEGLEYSIP FNTTLFVSAS IDEVWKTLFE AAILVLVVIL LFLQDWRATL VPATTVPVTI IGAFAAMDAM GFTINLSTLF AIILAIGIVV DDAIVIVEGV ARHIEEGMAG QPAAEKAMDE LFGPVVGITL VLMSVFLPAS FIPGLTGQMF KQFALVIAAT AFISAINAAT LKPTQCALWL RQPVPPEKRN FIFRGFNKIY AKAEHGYTGV ISRMVHHSKV MVIIALALMG VAAYGLTRVP TSFLPIEDQG YFLAHVQLPD ASNLNRTKKV MADVSERIRK VPGVETVLAI SGISVLDNSS TLANAGVTYI TLKPWSERYA TTGQDLLSLY INLNKAVADV VQAEVLILLP PAIQGIGNAA GFTMQPQLRN GNFDYRLLEQ ITTSMVDKAS AQSALQHVSS SFRAGAPQIE VEVNRVKAET LGVTVGQVFD TISSYLGSTY VNQINRFGNV FQVYVQAESG YRVTPTDLTN LKVRTPKGQM IPLGTLVTVK MVQGPPLISL YNLYPSSTVV GGTAQGFSSG QALSLMEQIA SATLPPGTGF EWTAMSYQEK AVGNQIYYVF GLAILLVYFV LAGQYESWIQ PMAVILAVPL ALLGTVGALV GLGISNNLYT QIGLVLLIAL ASKNAILIVE YAREKRAEGM EIMDAAVEAS RLRFRPILMT SFAFILGVLP LVFATGAGAN SRKSIGIAVV SGMLASTCLA VLFVPSFYTV LQRFEEKLKG RKKPAGHAPP EPPESPAADA GVPPAPASA
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