Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0411 |
Symbol | |
ID | 5421112 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 441545 |
End bp | 442417 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 640879658 |
Product | diaminopimelate epimerase |
Protein accession | YP_001415326 |
Protein GI | 154244368 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.254161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTCGAC CCGCCGTGAA CCCGCTCGCT AACCGCCCCT TCGTCAAGAT GAACGGCCTC GGCAACGAGA TCCTCGTGCT GGACCTGCGC GCCGACCCCG TGGAGGTGCC CGCCGCCGCG GCGCGCGCGC TGGCACGCCC CTCCGTGCTG CCGTTCGACC AGGCGATGGT GCTCTATCCG CCCCGGCGCG AGGGCACGGC GGCCTTCGTG CGCATCCTGA ATTCCGATGG GTCTTTTTCC GCCGCCTGTG GCAATGGCAC CCGCTGCATC GCCGCGCTGG AGGCTGAGCG CACCGGCGCC CCCCATGCCC TGTTCGAGAG CGAGGCCGGC CTTCTGGACT GCCTCGTGCG CCCGGACGGG CAGGTGGAGG TGGACATGGG CGCGCCGCGC TTCGACTGGC GCGACATCCC GCTCGCCCGT GACGTTGCGG AGACGGCGCA GGTGATCGTC CCGGGCTTCG AGGCGCTGGG GCCGACGAGC CTTGTCAGCA TGGGCAATCC CCACGCCGTC TTCTTCGTGC CCGACGCGAA TGCGGTGGAT GTGGAGAAGC TCGGCGCCGC GCTGGAACAT CATCCGCTGT TTCCTGAGCG CGCCAACATC TCCTTCGCCA GCCTCACCGC GCCCGACCGG ATCCTGCTGC ATGTGTGGGA GCGGGGTGCC GGACGGACCC GTGCCTGCGG CACCGCCGCC TGCGCCACCG GCGTTTCCGC CGCCCGCACC GGGCGGACCG GGCGTTCCGT GACCGTGACG CTGCCCGGCG GCGACCTTGA GATTTCCTGG CGCGAAGCCG ACGGCCACGT GCTGATGACC GGCCCGGTGG AGCACGAGTT CTCCGGCACT CTCTCCCCGG CCATGCTGGA GGAGGCCGCC TGA
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Protein sequence | MARPAVNPLA NRPFVKMNGL GNEILVLDLR ADPVEVPAAA ARALARPSVL PFDQAMVLYP PRREGTAAFV RILNSDGSFS AACGNGTRCI AALEAERTGA PHALFESEAG LLDCLVRPDG QVEVDMGAPR FDWRDIPLAR DVAETAQVIV PGFEALGPTS LVSMGNPHAV FFVPDANAVD VEKLGAALEH HPLFPERANI SFASLTAPDR ILLHVWERGA GRTRACGTAA CATGVSAART GRTGRSVTVT LPGGDLEISW READGHVLMT GPVEHEFSGT LSPAMLEEAA
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