| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0294 |
|---|
| Symbol | |
|---|
| ID | 5423996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 301649 |
|---|
| End bp | 302368 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640879540 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001415209 |
|---|
| Protein GI | 154244251 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.211719 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00732343 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGACG AGGACGAGAC GGACGAGGGA CTGCGCAGCC TTGCGGCGGC GCGGGCGCCC
CTGTCGCGCC TGTGCCTTGC CACCCGGCGG GTCACCCCGG TCGCGGACAT GCTGCGCTTC
GTGATGGGGC CGGACGGCGC GATCGTCCCG GACATCACCC GTAGGCTGCC CGGCCGTGGC
GCCTGGATCA GCGCCACCCG CGCGGACCTC GAGACCGCGC TGAAGCGCAA GGTCTTCGGC
CGCGCCTTCA AGGGCAAGGG CACCACGTCG CCCGACCTTG CCGATCTCGT GGATACATTG
CTGGAAAAGG ACGCCCGCAG CGCCCTCTCC CTGGCCAACA AGGCCGGGAA GGTGGTGACG
GGCACGACGA AGGTGGAGGC GGCTCTCGCC TCCGGTGACG TGCGGGTCCT CCTGCACGCC
CAGGACGCAC GCCCGGACGG GGTGCGCAAG CTCAAGGCCC TCACGCGCCA GGTCGAAAAT
GCCGGCGCCC GCCAGGTGTC CAGTGTCGAT TGCTTTACCG GCATCGAATT GGACTTGGCG
TTGGGGCGGT CAAATGTGGT ACATGCGGCG CTGCTCGCGC ATCCGACGAC GGAAGGGTTT
CTCGAGCGCT GCCACAAGCT CCTGCGCTGG CGGACGGGTA CGTCCGGCAC CGAGGAGCAT
GGGCAGGGCG AGGGTCACGC GCATGTAACC GGTCGGATGC AAGGAACGGA TACGGAATGA
|
|---|
| Protein sequence | MVDEDETDEG LRSLAAARAP LSRLCLATRR VTPVADMLRF VMGPDGAIVP DITRRLPGRG
AWISATRADL ETALKRKVFG RAFKGKGTTS PDLADLVDTL LEKDARSALS LANKAGKVVT
GTTKVEAALA SGDVRVLLHA QDARPDGVRK LKALTRQVEN AGARQVSSVD CFTGIELDLA
LGRSNVVHAA LLAHPTTEGF LERCHKLLRW RTGTSGTEEH GQGEGHAHVT GRMQGTDTE
|
|---|
| |