| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0291 |
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| Symbol | |
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| ID | 5422791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | - |
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| Start bp | 296547 |
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| End bp | 297638 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 640879537 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_001415206 |
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| Protein GI | 154244248 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0204129 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCCC CCTTTGCTGC CGACGCCGCC GCCCCGATCC TCGCCGCCGA GGCTGACGCC
CCCGTCGCGG CCGATGCGAC CGCCGCTCAG GCCCTGCCGG ACGGCGCCGA AGCCCCCCGC
GCTTCCCGCG AGCAGGACAA CCGCCCGCGC GCGCCCAAGC GCGACCTGGA CGGCTGGGTG
CTGCTGGACA AGCCCACGGG CATGACCTCC ACCCAGGCGG TGGCGGTGGT GAAGCGCATC
TTCGGCGCCC GCAAGGCCGG CCACGCCGGC ACCCTGGACC CGCTGGCCTC CGGCTGCCTG
CCCATCGCCT TCGGCGAGGC CACCAAGACC GTCCCTTACG TGATGGACGG CCGCAAGACC
TACCGCTTCA CGGTGCGCTT CGGCGTCGAG ACCGACACCG ACGACAGCGA GGGCAAGGCC
GTGGTCACCT CCGACCATCG CCCCACCGAC GCGGACATCG TCGCCGCGCT CGCCGCCTTC
CGGGGCGAGA TCATGCAGGT GCCGCCGGCC TATTCGGCCC TCAAGATCGG CGGCGAGCGC
GCCTATGACC TCGCCCGCGA GGGCGAGGAG GTGGTGCTCC AGCCCCGCCC GGTCACCATC
TTCCGCATCG AGCTGGTGGA GCGGCCCGAC GCCGACCATG CGGTGCTGGA AGCCGAATGC
GGCAAGGGTA CCTATGTGCG CGCCATCGCC CGCGACCTCG GCCGCATGCT GGACGCGCGC
GGCCACGTCT CGGCCCTGCG CCGGGCCTGC GTCGGGCCGT TCCTGGAAGA GGACCTGGTG
CCCCTCGACG AGATGCGCGA GCGCGCCGAG GCCGGCGAGG AAGCCCTGAT GGACGCCCTC
GACCCGGTGG CGCTGGCGCT GGAGGAGATC CCCCAGATCG CCGTCACCCC ACCCGACGCC
CATCGCCTGC GCTGCGGCCA GAGCGTGATC CTGCGCGGGC GCGACGCGCC CATCGTGCAG
GGCCATGCGG CCATTACCTG CCAGGGCGCC CTCATCGCCA TCGGCGACGT GGACGCAGGC
GAGATCTTCC CCCACCGCGT CTTCAACTGG GGCCAGAAGG ACAAGAAGCC CCCGCGCCGC
GGCAAGCGCT GA
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| Protein sequence | MTAPFAADAA APILAAEADA PVAADATAAQ ALPDGAEAPR ASREQDNRPR APKRDLDGWV
LLDKPTGMTS TQAVAVVKRI FGARKAGHAG TLDPLASGCL PIAFGEATKT VPYVMDGRKT
YRFTVRFGVE TDTDDSEGKA VVTSDHRPTD ADIVAALAAF RGEIMQVPPA YSALKIGGER
AYDLAREGEE VVLQPRPVTI FRIELVERPD ADHAVLEAEC GKGTYVRAIA RDLGRMLDAR
GHVSALRRAC VGPFLEEDLV PLDEMRERAE AGEEALMDAL DPVALALEEI PQIAVTPPDA
HRLRCGQSVI LRGRDAPIVQ GHAAITCQGA LIAIGDVDAG EIFPHRVFNW GQKDKKPPRR
GKR
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