| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0264 |
|---|
| Symbol | |
|---|
| ID | 5423563 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 267513 |
|---|
| End bp | 268313 |
|---|
| Gene Length | 801 bp |
|---|
| Protein Length | 266 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640879509 |
|---|
| Product | putative transmembrane anti-sigma factor |
|---|
| Protein accession | YP_001415179 |
|---|
| Protein GI | 154244221 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.674824 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0227624 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAATA CGCCCCTTCC GATCGGCGAA GACGATCTGC AGGCCTATGT CGACGACCGC
CAGAGCGAGG TCCGGCGATC AGAAGTCGAT GCCTACCTTG CGGATCATCC GGAACTCGCG
GCCCGGCTGG CGGAGGACCG TGATCAGCGC GAGACGCTGC GCCGTCAGCT TGCAGGCAAA
TTTACCGAGC CAATCCCGTC CCGCTTGAGG GTCGCTAATA TCCGCCTTTC GCGTCGGCAC
AAACGCGGCG TTTGGCTGCG AAACGGTATC GCGGCCGCCT TCTTACTGAC CCTGGGTGGC
GGGGCGGGAT GGATTGCGCG GGGCACGGCG CCCGTTGAGA TGCCACCGAC GGTCGCCGTT
ACCCGCGACG CCGTTGCCGC CTACCGCACC TTTGTCGTCG AGGTGAACCA TCCCGTCGAG
GTGCGTGCGT CGGACGAAGC TCACCTCGTC CAATGGTTGT CAAAGCGGCT GGGGCGGCCG
CTTCGTGTTC CGGATCTTTC AAGGTTCGGC TTTCGTCTGA TGGGCGGCCG GGTCCTCCCG
GCGGCGAGCG AAGCTGCGGC GATGCTGATG TATGACGATG ACAACGGCAC GCGTCTGACC
GTTTATGTGC GCGCCGCGGC GACTGGGGAG ACCGCTTTCC GGTTCTGGAA AGAAGGCGAC
GTTTCTACCT TCGCCTGGCT TGACCAGGGC TACGGATTTG CGGTTTCGGC AGCTTCGGAT
CGCGACCGTT TGTTCCCGAT CGCCGAGGCG GTTTATAAGA CCCTCGATGG TGGGGTCTCT
GTTCCGCGGC GAGACGGGTG A
|
|---|
| Protein sequence | MTNTPLPIGE DDLQAYVDDR QSEVRRSEVD AYLADHPELA ARLAEDRDQR ETLRRQLAGK
FTEPIPSRLR VANIRLSRRH KRGVWLRNGI AAAFLLTLGG GAGWIARGTA PVEMPPTVAV
TRDAVAAYRT FVVEVNHPVE VRASDEAHLV QWLSKRLGRP LRVPDLSRFG FRLMGGRVLP
AASEAAAMLM YDDDNGTRLT VYVRAAATGE TAFRFWKEGD VSTFAWLDQG YGFAVSAASD
RDRLFPIAEA VYKTLDGGVS VPRRDG
|
|---|
| |