| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0243 |
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| Symbol | |
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| ID | 5422506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 251703 |
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| End bp | 253106 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640879488 |
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| Product | Type IV secretory pathway VirD4 protein-like protein |
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| Protein accession | YP_001415158 |
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| Protein GI | 154244200 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00639777 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000749046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCCAAGA CGCTGATGAC CCAGCCCGTA AAGCGCATCC TCGGCACCGG CTTCGACGGC
AAGCCGATCT TCGCCCCGCG CCACTCCCAT GCCTTGCTGC TCGCTGCGGC CGGCGGCGGC
AAGACCACCT GCGGCGCCGT CCCCTGGCTC CAGTCCCTCG TGGCCGACAC CGATACCGGC
CGCGCCCTCG TCATCACCGA TTCCAAGGAA GGCGAGATCG CCGCCCAGTG CGCCGACATG
TGCGCCAAGG CCGGACGCAC CGTCGCCATC ATCGATGGCT TCGGCGTGCT CGACGCCCAT
TGGGGCGGGA CCAATCCCTA CACCGTCTCC CTCAACCCCA TGGGGGCGGT GGTCTCCTCC
TTCGTGAAGG CCAACGGCGA GCTCATCTTC TCCACCGAGA ACGCCAACCA GGCCCTCATC
GAGGAGCCGC CCCGGGACCA GCGCAATACC TATTGGCGGG ACGAACCCCG CACGCTCGGA
GAGTTCTGCA CTTGCGTGTT GCTCAAGCGC AATCCCAGGC TCGCCACCCC CGGCGGGGTC
TGGTCCATCC TGTCCGATCC CAAGCTCCTG CTCGATATGG CGCAGGTGGA AGCGGAAGAG
GGCGACGACT ATCTGCGCGC CCTCGCGCTC CATGTGCTCG GCATGGCCCG CAACGAGGAG
CACTTCCCCC AGCACCGGGC CGCGGCGTTG AAGGCCCTGC GCGTCTATGC GGCGAGCTCG
CCGCTGCACC GGGCGGGCGT CGGCGCCACC CGCACCCATG AGGACCTGAT CCGCCAGAAA
GCGGTGATCT TCCTGGTCGG CCCGGTGCGC CACATGGAGC GGCTCGGCGC CGACTACGCC
CTGCATTTGC AGTCCTTCAT GGAGGTGGTG CTCAGCGGCA GGGCACCGCC CGTCACCTTC
ATCCTCGACG AGTTCACCAA CGCGCCGCTG AAAGCTCTCG TCTCCCAGCT CACCACCATG
CGCGGCTACG GAGGAAACTG CCTCATGATC GCCCAGTCGA GATCCGAGAT CCAGCGCCGG
TACGGCGACA AGGAAACCCT CACCATCGAG GAGAATGCCG TCGTCAAGCA ATGGTTCGGC
TTCTCCTCCT TCGAGGAGGC CGAGCGGGTG TCCCACGCCA TCGGCGAGGC GCTGGCGGTG
TCCCGCGCCC TCGGCATCCA AAGCGGCCAG TTCGGCGTCT CCAGCAACTA TTCCACCGCC
AAGGAACGCC TGTTCACAGC GGAGGAGTTG ATGCGCCTGC CCCCGGACGA GCAGGTCATC
CATGTGAAGG ACGTGGGCTT CATCCATTGC CGCAAGATCC GCCAGAACGA GATCGCCCCG
TACTGCTTCG ATCTCGCCCC CAACCCGCTG GAAGGCGGGC TGCTGGCGCC TGATCCCAAG
GTGTGGCTGG AGGGCGGGCG ATGA
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| Protein sequence | MAKTLMTQPV KRILGTGFDG KPIFAPRHSH ALLLAAAGGG KTTCGAVPWL QSLVADTDTG
RALVITDSKE GEIAAQCADM CAKAGRTVAI IDGFGVLDAH WGGTNPYTVS LNPMGAVVSS
FVKANGELIF STENANQALI EEPPRDQRNT YWRDEPRTLG EFCTCVLLKR NPRLATPGGV
WSILSDPKLL LDMAQVEAEE GDDYLRALAL HVLGMARNEE HFPQHRAAAL KALRVYAASS
PLHRAGVGAT RTHEDLIRQK AVIFLVGPVR HMERLGADYA LHLQSFMEVV LSGRAPPVTF
ILDEFTNAPL KALVSQLTTM RGYGGNCLMI AQSRSEIQRR YGDKETLTIE ENAVVKQWFG
FSSFEEAERV SHAIGEALAV SRALGIQSGQ FGVSSNYSTA KERLFTAEEL MRLPPDEQVI
HVKDVGFIHC RKIRQNEIAP YCFDLAPNPL EGGLLAPDPK VWLEGGR
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