| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0206 |
|---|
| Symbol | |
|---|
| ID | 5422595 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 208071 |
|---|
| End bp | 208742 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640879451 |
|---|
| Product | monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| Protein accession | YP_001415122 |
|---|
| Protein GI | 154244164 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
|---|
| TIGRFAM ID | [TIGR02070] monofunctional biosynthetic peptidoglycan transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00937059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCTC TGGTGCTGCG CGTGATGCTG GCCCTCGCCG CGATCCCGCT GATGCTGTCC
ATTGCCTACA ATGTGGTCAA CCCGGTCTCC ACGCTCATGC TGCTGCGGTG GGTTGAGGGC
AAGCGGGTGG AGCGGGTCTG GACCCCCATC GAGCAGATGT CGCCGGCGCT GGTGCGCACC
GTCATCGCCT CGGAGGATGC GAGCTTCTGC AGCCATTGGG GCGTGGACCT CGACGAGATG
CGCGCCGCTA TCGACAAGGC GGACGAACTG GACGACGCCC GCGGCGCCTC CACCATCCCC
ATGCAGATCG CCAAGAACCT GTTCCTGTGG CCGGGGCGGG CGCTGATCCG CAAGGCGTTC
GAGATTCCGC TGGCCCTGTG GCTGGACCTG GTGGTGAGCA AAAGACGGCT GATCGAGATC
TATCTCAACA TCGCCGAATG GGGCCCGAAC GGGGAGTTCG GGGTGGAAGC GGGCGCGCGC
CGGGCCTTCG GCATCCCCGC GGCGCGGGTA GATGCGCGGC AGGCGGCCCT GCTGGCGGTG
ATGCTGCCCA ACCCCCGGCG GCGCGATGCA GGCAACCCTT CCGCCGGCGT GGAACGCCTC
GCATCCCGGC TCCAGGCGCG GGTGCCCAGG GAGGGGCCGG AGCTGACGGC CTGCCTCGGG
CCGCTGCGGT AA
|
|---|
| Protein sequence | MVALVLRVML ALAAIPLMLS IAYNVVNPVS TLMLLRWVEG KRVERVWTPI EQMSPALVRT
VIASEDASFC SHWGVDLDEM RAAIDKADEL DDARGASTIP MQIAKNLFLW PGRALIRKAF
EIPLALWLDL VVSKRRLIEI YLNIAEWGPN GEFGVEAGAR RAFGIPAARV DARQAALLAV
MLPNPRRRDA GNPSAGVERL ASRLQARVPR EGPELTACLG PLR
|
|---|
| |