| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0156 |
|---|
| Symbol | sucA |
|---|
| ID | 5422876 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 151034 |
|---|
| End bp | 153988 |
|---|
| Gene Length | 2955 bp |
|---|
| Protein Length | 984 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640879401 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | YP_001415072 |
|---|
| Protein GI | 154244114 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGCG CGGAACAGAA CGACGTTTTC CTCTCCACCT CCTTCCTCGA CGGCGCCAAT
GCCGCCTGGA TCGAGGATCT CTACGCCCGC TACGAAGCCG ACCCGAATTC GGTCAGCCCC
GACTGGCAGA GCTTCTTCGC AGCGCTGAAG GATGATCCGA ACGCGGTGGT CCAGAATGCG
CGCGGCGCTT CCTGGAAGAA GCCGCACTGG CCGGTGCACG CCAATGGCGA GCTGGTCTCG
GCCATGGATG GCCAGTGGAT CGAGGTGGAA AAGGCCCTCT CGGACAAGGT GAAGGCCAAG
GCGCAGAAGG CGGGCGTCGA ATTCTCCGCC ACCGAGGTGC AGCAGGCCAC CCGCGACAGC
GTCAAGGCGC TGATGATGAT CCGCGCCTAT CGCATGCGCG GCCACCTGCA CGCCAATCTC
GACCCGCTCG GCCTGACCCC GCCGCGCGAG GCACCGGAGC TTGATCCTGC CTCCTACGGC
TTCTACGAGG CCGACCTCGA CCGCAAGATC TTCATCGACC ACGTGCTGGG CCTCGAGTTC
GCCTCGGTCC GCCAGATGGT GGCGATCCTG CGCCGCACCT ATTGCTCCAG CATCGGCGTC
GAGTTCATGC ACATCTCCTC GCCCGAGGAG AAGGCCTGGA TCCAGGAGCG TATCGAGGGT
CCCGACAAGG AGGTGACCTT CACCCGCGAG GGCAAGCGCG CCATCCTTAA CAAGCTGGTG
GAAGCCGAGG GCTTCGAGAA GTTCCTCGAT GTGAAGTTCA CCGGCACCAA GCGCTTCGGC
CTCGACGGCG GCGAGAGCCT GATCCCGGCG CTGGAACAGA TCATTAAGCG CGGCGGCAAC
CTCGGCGTGA AGGACATCGT GTTCGGCATG GCCCATCGCG GCCGCCTGAA CGTGCTCACC
CAGGTGATGG GCAAGCCCCA CCGCGCCCTG TTCCACGAGT TCAAGGGCGG CTCCTGGGCC
CCCGACGACG TGGAAGGCTC GGGTGACGTG AAGTACCACC TGGGTGCCTC GTCCGACCGC
GAGTTCGACA ACAACAAGGT CCACCTGTCG CTGACCGCCA ACCCGTCGCA TCTCGAGATC
GTGGATCCGG TGGTGCTGGG CAAGGCCCGC GCCAAGCAGG ACCAGCTGGG CGACACCGAG
CGGACCAAGG TGCTGCCGCT GCTGCTGCAC GGCGACGCCG CCTTCGCCGG CCAGGGCGTG
GTGGCCGAGT GCCTCGGCCT CTCCGGCCTG AAGGGCCACC GCACCGGCGG GTCGATCCAC
GTCATCATCA ACAACCAGAT CGGCTTCACC ACCAATCCGC GCTATTCGCG CTCCTCGCCT
TATCCCTCTG ACGTGGCGAA GATGATCGAG GCGCCGATCT TCCACTGCAA CGGCGACGAT
CCGGAATCGG TGGTGTTCTG CGCCAAGGTG GCGACCGAGT TCCGCCAGCG CTTCCACAAG
CCCGTCGTCA TCGACATGTT CTGCTACCGC CGCTTCGGCC ACAACGAGGG CGACGAGCCG
GCGTTCACCC AGCCGAAGAT GTACAAGGTG ATCCGCCAGC ACCCGAGCGT GCTGGAGCTC
TACACCAAGA AGCTCGAAGC CGAGGGCGTG GTTACCTCCG GCGAGGTCGA CACCATGCGC
GCGGCGTGGC GCGAGCGGCT GGAGGCCGAG CACGAGGCCG GACAGGCCTA CAAGCCCAAC
AAGGCCGACT GGCTCGACGG CCGCTGGGCC GGCTTCAAGG CCACCCATGA GGACGACGAT
CCGCGGCGCG GCAACACCGG CGTGGCCGAG GACACGCTGA AGGCCATCGG CGAGAAGATT
ACCACCGTGC CGGAGGGCTT CCAGGTCCAC CGCACCATCC AGCGCTTCCT CGACAACCGC
CGCAAGTCCA TCGAGGACGG CAAGGGCATC GACTGGGCGA CGGGCGAGGC GCTGGCCTTC
TCGTCCCTGC TGCTGGAAGG CAACCCGGTG CGCCTGTCCG GCCAGGATGT GGAGCGCGGC
ACGTTCTCCC AGCGCCATTC GGTGCTGACC GACCAGGAGA CGGAGGCCCG CTTCAAGCCC
TTCAACCATC TCTCCGAGAC CCAGGCCAAG TACGAGGTCA TCAACTCGAT GCTCTCGGAG
GAGGCGGTGC TCGGCTTCGA GTATGGCTAC ACCCTGTCCG AGCCCAATAC CCTGGTGCTC
TGGGAGGCGC AGTTCGGCGA CTTCGCCAAC GGCGCGCAGG TGCTGTTCGA CCAGTTCATC
TCCTCGGGCG AGCGCAAGTG GCTGCGCATG TCCGGCCTCG TCTGCCTGCT GCCCCACGGC
TATGAGGGCC AGGGGCCGGA GCATTCCTCC GCCCGCCTCG AGCGCTATCT GCAGCTCTGC
GCCGAGGACA ACATGCAGGT GGCCAACGTC TCCACCCCGG CCAACTATTT CCACATCCTG
CGCCGGCAGA TGAAGCGGGA GTTCCGCAAG CCGCTGATCC TGATGACGCC GAAGTCGCTG
CTGCGCCACA AGCGGGCGGT GTCCTCGCTG AGCGACATGG TGACCGGCAC TTCGTTCCAC
CGGGTGCTCT GGGACGATGC CCAGTCCCAT CCGGAGGAAA ACGCCATCAA GCTGGTGCCG
GACGACAAGA TCCGTCGCGT CGTGCTGTGC ACGGGCAAGG TCTATTACGA CCTGCTCGAG
GAGCGCGAGA AGCGCGGCGT GTCGGACGTC TACCTGATGC GTGTGGAGCA GCTTTACCCG
TTCCCGCTCA AGACCCTGGT GCAGGAACTC TCGCGCTTCA AGAACGCCGA GGTGTCCTGG
TGCCAGGAAG AGCCCAAGAA CCAGGGCTCC TGGGCGTTCG TGCAGCCCTA TCTGGAATGG
GTGCTGGAGC AGGTGGGCGG CGCCGCGAAG CGTCCGCGCT ATGCCGGTCG TCCCGCCTCG
GCGGCGACCG CCACCGGCCT CATGTCGAAG CACCTGGCCC AGCTCAAGGC CTTCCTCGAC
GAAGCCCTGG GCTGA
|
|---|
| Protein sequence | MSRAEQNDVF LSTSFLDGAN AAWIEDLYAR YEADPNSVSP DWQSFFAALK DDPNAVVQNA
RGASWKKPHW PVHANGELVS AMDGQWIEVE KALSDKVKAK AQKAGVEFSA TEVQQATRDS
VKALMMIRAY RMRGHLHANL DPLGLTPPRE APELDPASYG FYEADLDRKI FIDHVLGLEF
ASVRQMVAIL RRTYCSSIGV EFMHISSPEE KAWIQERIEG PDKEVTFTRE GKRAILNKLV
EAEGFEKFLD VKFTGTKRFG LDGGESLIPA LEQIIKRGGN LGVKDIVFGM AHRGRLNVLT
QVMGKPHRAL FHEFKGGSWA PDDVEGSGDV KYHLGASSDR EFDNNKVHLS LTANPSHLEI
VDPVVLGKAR AKQDQLGDTE RTKVLPLLLH GDAAFAGQGV VAECLGLSGL KGHRTGGSIH
VIINNQIGFT TNPRYSRSSP YPSDVAKMIE APIFHCNGDD PESVVFCAKV ATEFRQRFHK
PVVIDMFCYR RFGHNEGDEP AFTQPKMYKV IRQHPSVLEL YTKKLEAEGV VTSGEVDTMR
AAWRERLEAE HEAGQAYKPN KADWLDGRWA GFKATHEDDD PRRGNTGVAE DTLKAIGEKI
TTVPEGFQVH RTIQRFLDNR RKSIEDGKGI DWATGEALAF SSLLLEGNPV RLSGQDVERG
TFSQRHSVLT DQETEARFKP FNHLSETQAK YEVINSMLSE EAVLGFEYGY TLSEPNTLVL
WEAQFGDFAN GAQVLFDQFI SSGERKWLRM SGLVCLLPHG YEGQGPEHSS ARLERYLQLC
AEDNMQVANV STPANYFHIL RRQMKREFRK PLILMTPKSL LRHKRAVSSL SDMVTGTSFH
RVLWDDAQSH PEENAIKLVP DDKIRRVVLC TGKVYYDLLE EREKRGVSDV YLMRVEQLYP
FPLKTLVQEL SRFKNAEVSW CQEEPKNQGS WAFVQPYLEW VLEQVGGAAK RPRYAGRPAS
AATATGLMSK HLAQLKAFLD EALG
|
|---|
| |