| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0091 |
|---|
| Symbol | |
|---|
| ID | 5420794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 100648 |
|---|
| End bp | 102549 |
|---|
| Gene Length | 1902 bp |
|---|
| Protein Length | 633 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640879336 |
|---|
| Product | nitrogenase molybdenum-cofactor biosynthesis protein NifE |
|---|
| Protein accession | YP_001415007 |
|---|
| Protein GI | 154244049 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | [TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.77225 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTCGG TTTCCGCTAC GATCCAGGAA GTCTTCAACG AGCCAAGCTG CGCGAAGAAC
CAGAACAAAT CGGAAGCGGA AAAGAAGAAG GGGTGCACCA AGCAGCTCCA GCCCGGCGGT
GCCGCCGGCG GCTGCGCCTT CGACGGCGCC AAGATCGCCC TCCAGCCCCT GACCGACGTC
GCCCATCTCG TGCACGGCCC GATCGCCTGC GAGGGCAACA GCTGGGACAA TCGCGGCGCG
AAGTCGTCCG GCTCGCAGAT CTGGCGGACG GGCTTCACCA CGGACATCAA CGAGACCGAC
GTGGTGTTCG GCGGTGAGAA GCGCCTGTTC AAGTCGATCA AGGAAATCAT CGAGAAGTAC
AATCCCCCCG CCGTCTTCGT CTACCAGACC TGCGTGCCCG CCATGATCGG CGACGACATC
GACGCGGTCT GCAAGGCGGC AAAGGAGAAG TTCGGCACGC CGGTGATCCC GGTGAACTCG
CCCGGCTTCG TGGGTCCGAA GAACCTCGGC AACAAGCTCG CGGGCGAAGC TATCCTCCAG
CACGTCATCG GCACCGAGGA GCCGGAATAC ACCACGCCCT ACGACCTGAA TATCATCGGC
GAATACAATC TGTCCGGTGA ATTGTGGCAG GTGAAGCCGT TGCTCGACGA GCTCGGCATC
CGCATCATGG CCTGCATCTC CGGCGACGGG CGCTACAAGG ATGTGGCCTC CTCGCACCGC
GCCAAGGCGG CGATGATGGT GTGTTCCAAG GCCATGATCA ACGTGGCCCG CAAGATGGAG
GAGCGCTACG ACATCCCCTT CTTCGAGGGC TCCTTTTACG GCATCCAGGA CTCGTCCGAC
TCGCTCCGCG AGATTGCCCG CATGCTCATC GAGCGCGGCG CCGATCCCGA GCTGATGGAC
CGCACCGAGG CCCTCATCGA GCGCGAGGAG GCGAACGCCT GGGCCGCCAT CGCCAAGTAC
AAGCCCCGCT TCAAGGACAA GAAGGTGCTG CTGATCACCG GCGGCGTGAA GTCCTGGTCG
GTGGTGGCGG CGTTGCAGGA AGCCGGCCTC GAGCTGGTGG GCACTTCCGT TAAGAAGTCC
ACCCGCGAGG ACAAGGAGCG CATCAAGGAG CTCATGGGGC AGGACGCCCA CATGATCGAC
GACATGACGC CCCGTGAAAT GTACAAGATG CTGAAGGACG CGAAGGCCGA CATCATGCTC
TCGGGCGGCC GCTCGCAGTT CATCGCACTC AAGGCCGCCA TGCCGTGGCT CGACATCAAC
CAGGAGCGCC ACCACGCCTA CATGGGCTAT GTGGGCATGG TGAAGCTGGT CGAGGAGATC
GACAAGGCGC TCTACAATCC CATCTGGGAG CAGGTGCGCA AACCCGCCCC GTGGGACAAT
CCGGCCAACA ACTGGCAGAA CCGCGCCATC GCCGAGATGG AGGCGGAAGC CGCCGCGCTC
GCCGCCGATC CGGTGGCCGC CGAGAAGGCG CGCCGGGCCA AGAAGATCTG CAACTGCAAG
AGTGTCGACC TCGGTACCAT CGAGGACGCC ATCGCCGCCC ACGGCCTCAC CACCGTGGAA
GGCGTGAAGA CCCACACCAA TGCCTCCGGC GGCTGCGGCG CATGCGCCGG TCGCATCGAG
GAGATCTTCG AGGCCCGTGG CCTGGTGCCG GCGGAAGAGC CGGAGCTTGA TCCGGTCGCG
GCGGAGGCCA AGCGGCGCGC CAAGAAGGTG TGCAATTGCA TGAGCGTGGA TGTAGGCACC
ATCGAGGATG CCATCCACGC CGGCGCTGCC AACCTCGCCG ACGTGAAGGC GCAGACCAAG
GCCACCGGCG GCTGCGGCGG CTGCGCCGAG CGCATCGAGG AGATGCTGGA CGCGGCTGTT
GCGGATGCCG ACGTGCCGGT CACCCTCGTG GCAGCGGAAT AG
|
|---|
| Protein sequence | MSSVSATIQE VFNEPSCAKN QNKSEAEKKK GCTKQLQPGG AAGGCAFDGA KIALQPLTDV
AHLVHGPIAC EGNSWDNRGA KSSGSQIWRT GFTTDINETD VVFGGEKRLF KSIKEIIEKY
NPPAVFVYQT CVPAMIGDDI DAVCKAAKEK FGTPVIPVNS PGFVGPKNLG NKLAGEAILQ
HVIGTEEPEY TTPYDLNIIG EYNLSGELWQ VKPLLDELGI RIMACISGDG RYKDVASSHR
AKAAMMVCSK AMINVARKME ERYDIPFFEG SFYGIQDSSD SLREIARMLI ERGADPELMD
RTEALIEREE ANAWAAIAKY KPRFKDKKVL LITGGVKSWS VVAALQEAGL ELVGTSVKKS
TREDKERIKE LMGQDAHMID DMTPREMYKM LKDAKADIML SGGRSQFIAL KAAMPWLDIN
QERHHAYMGY VGMVKLVEEI DKALYNPIWE QVRKPAPWDN PANNWQNRAI AEMEAEAAAL
AADPVAAEKA RRAKKICNCK SVDLGTIEDA IAAHGLTTVE GVKTHTNASG GCGACAGRIE
EIFEARGLVP AEEPELDPVA AEAKRRAKKV CNCMSVDVGT IEDAIHAGAA NLADVKAQTK
ATGGCGGCAE RIEEMLDAAV ADADVPVTLV AAE
|
|---|
| |