| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0054 |
|---|
| Symbol | |
|---|
| ID | 5425361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 57930 |
|---|
| End bp | 58487 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640879299 |
|---|
| Product | 3-hydroxydecanoyl-(acyl carrier protein) dehydratase |
|---|
| Protein accession | YP_001414970 |
|---|
| Protein GI | 154244012 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases |
|---|
| TIGRFAM ID | [TIGR01749] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.232719 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAC GCTTGAGAAT GGCGGACCGG CAAACCAGCT TCGCATATGA AGATCTCCTC
GCCTGCGGAC GTGGCGAGCT GTTCGGCGCC GGAAACGCGC AATTGCCGCT GCCGCCCATG
CTGATGTTCG ACCGCATCGT CGAGATTTCC GAGACCGGCG GCGAATTCGG CAAGGGCTTC
ATCCGCGCCG AGCTCGACGT GAACCCGGAC CTGTGGTTCT TCGCCTGCCA CTTCAAGGGC
GACCCGGTTA TGCCCGGCTG CCTGGGCCTC GACGCCATGT GGCAGTTGGT CGGCTTCTAT
CTCGGCTGGC TGGGCTCGCC CGGCCGCGGC CGGGCGCTGG GCCTCGGCGA ACTCAAGTTT
TCAGGCCAGG TTCTGCCGGG CGTGAAGAAG GTGGTCTACG GCATCGAGTT CAAGCGGGTG
ATGCGCTCCA AGCTGGTGCT GGGCATCGCC GATGGCTGGC TGTCGGCGGA CGATGCCGTC
ATCTATCGCG CGAAGGATCT GAAGGTGGGC CTGTTCCAGG CCGATGCGGC ACCCGCCGCG
GGAGCGGCGA GCGCCTGA
|
|---|
| Protein sequence | MATRLRMADR QTSFAYEDLL ACGRGELFGA GNAQLPLPPM LMFDRIVEIS ETGGEFGKGF
IRAELDVNPD LWFFACHFKG DPVMPGCLGL DAMWQLVGFY LGWLGSPGRG RALGLGELKF
SGQVLPGVKK VVYGIEFKRV MRSKLVLGIA DGWLSADDAV IYRAKDLKVG LFQADAAPAA
GAASA
|
|---|
| |