| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0010 |
|---|
| Symbol | |
|---|
| ID | 5424950 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | - |
|---|
| Start bp | 10609 |
|---|
| End bp | 11328 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 640879255 |
|---|
| Product | GntR family transcriptional regulator |
|---|
| Protein accession | YP_001414926 |
|---|
| Protein GI | 154243968 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1802] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.561636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00449189 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGATGCCA TGGCCGAGTT GCGGCAGATC GAGAAGGAAA ATCTATCGGC CCGCGTCTAC
GGCCGCATCC GCCGGGCGCT GATCGACGGG CAGTTCGAGC CCGGCGAGCG GCTGCGCATC
TCCGCGCTCG CGGCCGATCT GGGCACCTCC ATCACCCCGG TGCGCGAGGC CATCTTCCGC
CTGGTGAGCG AGCAGGCGCT GGAGATGAAG GCCGCCACCG CCATTCATGT GCCGCTCTTG
GACAGCGCCC GGCTGAAGGA GATCCAGCTC ATCCGCATGG AGCTGGAGGG CGCCGCCTCC
GCCCGCGCCG CCCAGCGCAT CACCGACAAG CAGATCCGCC GGCTGGAGCA GATCCAGGAC
GAGTTCATCG AGGCCGCCGC CACCAACCCG AAGAAGGCGA GCCTGAAGAA CCGCGACTTC
CACTTCGCGC TGATCGAGAT CGCCGAGCTG CCGCTGCTCG AATCCATCGT GGAGAATATG
TGGACGCTGA TGGGACCGCT GCTCAGCGTG TTCCACTCCA CCTTGCCGCC GCGCCAGATC
GCCGGCGAGG ACCACCGCCA CTATGACGTG CTGGAAGCGC TCCGGGCGCG CGATCCGGAG
CGGGCGCAGC ATGCCATCCA GCAGGACATC GCCTGGGGCC TCGTCATGGC CGACTGGCTG
GACGAGCAGG CCAAGGCCCC GCCCGGCAAG CGCAAGCTCG CCTCCCTCAC CGCCGAGTGA
|
|---|
| Protein sequence | MDAMAELRQI EKENLSARVY GRIRRALIDG QFEPGERLRI SALAADLGTS ITPVREAIFR
LVSEQALEMK AATAIHVPLL DSARLKEIQL IRMELEGAAS ARAAQRITDK QIRRLEQIQD
EFIEAAATNP KKASLKNRDF HFALIEIAEL PLLESIVENM WTLMGPLLSV FHSTLPPRQI
AGEDHRHYDV LEALRARDPE RAQHAIQQDI AWGLVMADWL DEQAKAPPGK RKLASLTAE
|
|---|
| |