Gene Xaut_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0006 
Symbol 
ID5421966 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp7160 
End bp8194 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content66% 
IMG OID640879251 
Productinner-membrane translocator 
Protein accessionYP_001414922 
Protein GI154243964 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.273042 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.15345e-05 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCGCCT CCTTCACCCT CATCCTCGGC CTGCCGCTGT TCGTGGCGGC GCTGATCCTG 
CCGTTCGTGG TCGCCGACAG CTATGTGGTC CATTCGGCGG CCATGGTGCT CTATTTCGCC
TACATGGCCT CGTCGTGGAA CTTCGTCTGC GGCTATGTGG GGCAGGTCTC GCTGGGCCAC
GCCGCCTTCT CCGGCATCGC CGGCTATGCC AGCGTGCTGC TGTTCACCGG GCTCGGCCTG
TCGCCCTGGA TCGGCATGAT CCTCGGCGGC CTGCTGGCGG CGGCCATCTC GGTGCCGGTG
GGCTATGCCA CCTTCCGGCT GAAGGGGCCC TACTTCACCC TCACCAGCAT CGCCTTTGCC
GAGATCATGC GCATCTGGCT GGAAAATACC GACGAGTTCC TCGGCATCCC GCTGAAGGGC
GCGCAGGGGC TCACGGTTCC GCCGGTGGGA GGCACCAGCT TTCTCGCTTT CCAGTTCGAC
GGCAAGCTGC CCTATTACTT CATCATCCTC GCCATGCTGG TGGGGGTGAT GGCGGCGACC
CATGTCATGG AGCGCTCGCG GCTCGGCTTT TACCTCAAAG CCATCCGCGG CAACCGCGAC
GGCGCCGAGG CGCTGGGCAT CGACCCCACC CGCTACTGCC TGACCGCGCT GGCGCTCTCC
GCCTTCCTCA CCGGCCTTGG CGGCGCCTAT TACGCGCAGC TGTTCCGCTA CATCAATCCG
GAGCGGAACA TGGGCATCGA CCTGTCCATC GACATGGCGG TGATGACTAT CGTGGGCGGG
CAGGGCACCC TGCTCGGCCC GACGCTGGGC GCTTTGGTGC TGCATCCGGT GGGCGAGATG
GTGCGCGCCA TGCTGGGCGG CCATGTGCTG GGGCTGCACC TCATCATCTA CGGCGTCGTG
CTGATGCTGG CGGTGCTGTA TTTCCCGAAA GGCATCATCG CCCCGCTCCA GCGCTGGCTG
ACCCCTGCAC CTAAAACACC CGCCCCGAAA GCGCCGGCGC ACATGGTGAC GCCCAAGGAG
GTCGAGGGAC GATGA
 
Protein sequence
MRASFTLILG LPLFVAALIL PFVVADSYVV HSAAMVLYFA YMASSWNFVC GYVGQVSLGH 
AAFSGIAGYA SVLLFTGLGL SPWIGMILGG LLAAAISVPV GYATFRLKGP YFTLTSIAFA
EIMRIWLENT DEFLGIPLKG AQGLTVPPVG GTSFLAFQFD GKLPYYFIIL AMLVGVMAAT
HVMERSRLGF YLKAIRGNRD GAEALGIDPT RYCLTALALS AFLTGLGGAY YAQLFRYINP
ERNMGIDLSI DMAVMTIVGG QGTLLGPTLG ALVLHPVGEM VRAMLGGHVL GLHLIIYGVV
LMLAVLYFPK GIIAPLQRWL TPAPKTPAPK APAHMVTPKE VEGR