| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0005 |
|---|
| Symbol | |
|---|
| ID | 5421965 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xanthobacter autotrophicus Py2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009720 |
|---|
| Strand | + |
|---|
| Start bp | 6258 |
|---|
| End bp | 7142 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640879250 |
|---|
| Product | inner-membrane translocator |
|---|
| Protein accession | YP_001414921 |
|---|
| Protein GI | 154243963 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.901395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00000431174 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATCCCC TGACCCTTTC CTTTGCGGTC ATCAACGGAC TTCTGCTCGG CGGAATCTAC
GGTGGCGTCG CCCTCGGGCT GAGCCTCATC TTCGGTGTCA TGCGCGTCAT CAATTTTGCG
CACGGCTCGT TCCTGATGCT GGCCATGTAT TGCTCGTATC TTCTTTGGGC GAGCCTTGGG
GTGCATCCCT ATGTCAGCAT CCTTGTCACC GTGCCGTTCC TGTTCGCCGT CGGCTATGTG
GTGCAGAGCG TAGTCATCTC CCCGCTCATC CGGCGCGAGC GGGCGCTGGT GGTGGAACCC
ACGAGCGCCC TGCTGCTCAC CGCCGGCGTC TATCTGGTGG TGGACAACAG CGTGCTCATG
GCGTTCGGCC CGGACGTGCG CTCGGTGACC ACCGACATCA CCTATGAATC GATCTTCGTC
GCCGGCCTGC CCATCAACAT GGCCCGGCTC ATCGGCTTTG CCGCCGCGAT CCTCGTGGCC
TTCGCCCTGT CGTTCTGGCT CAAGCATTCG GACATGGGCC GCGCCATCCG CGCCACGGCG
CAGAACCGGG ATGCGGCGGC CATGTCCGGC ATCAACGTGC CGCTGATCTA CAACGTCACC
TTCGGCCTCG GCTGCGCCGT GCTCGGCCTG TTCGGGGCGC TGCTGGTGCC GTTCTTCTCC
ATCACCCCCA CCATCGGCCT GTCGTTCGGC ATCAAGTCGT TCCTGGTGGT GGTGCTGGGC
GGCATCGGCT CCATCCCCGG TTCGATCCTC GGCGGGCTGC TGCTCGGCGT GTTCGAATCC
GTGGCCGCCC AGTTCGTCAC CGCCACCTCG GCGGCGATCT TCTCCTTCGG CCTGTTCATC
GTGATCCTGC TCATGCGGCC TGCGGGCCTC ATGGGCCGAG CTTGA
|
|---|
| Protein sequence | MDPLTLSFAV INGLLLGGIY GGVALGLSLI FGVMRVINFA HGSFLMLAMY CSYLLWASLG
VHPYVSILVT VPFLFAVGYV VQSVVISPLI RRERALVVEP TSALLLTAGV YLVVDNSVLM
AFGPDVRSVT TDITYESIFV AGLPINMARL IGFAAAILVA FALSFWLKHS DMGRAIRATA
QNRDAAAMSG INVPLIYNVT FGLGCAVLGL FGALLVPFFS ITPTIGLSFG IKSFLVVVLG
GIGSIPGSIL GGLLLGVFES VAAQFVTATS AAIFSFGLFI VILLMRPAGL MGRA
|
|---|
| |