Gene Xaut_0005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0005 
Symbol 
ID5421965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp6258 
End bp7142 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content65% 
IMG OID640879250 
Productinner-membrane translocator 
Protein accessionYP_001414921 
Protein GI154243963 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.901395 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.31174e-06 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGATCCCC TGACCCTTTC CTTTGCGGTC ATCAACGGAC TTCTGCTCGG CGGAATCTAC 
GGTGGCGTCG CCCTCGGGCT GAGCCTCATC TTCGGTGTCA TGCGCGTCAT CAATTTTGCG
CACGGCTCGT TCCTGATGCT GGCCATGTAT TGCTCGTATC TTCTTTGGGC GAGCCTTGGG
GTGCATCCCT ATGTCAGCAT CCTTGTCACC GTGCCGTTCC TGTTCGCCGT CGGCTATGTG
GTGCAGAGCG TAGTCATCTC CCCGCTCATC CGGCGCGAGC GGGCGCTGGT GGTGGAACCC
ACGAGCGCCC TGCTGCTCAC CGCCGGCGTC TATCTGGTGG TGGACAACAG CGTGCTCATG
GCGTTCGGCC CGGACGTGCG CTCGGTGACC ACCGACATCA CCTATGAATC GATCTTCGTC
GCCGGCCTGC CCATCAACAT GGCCCGGCTC ATCGGCTTTG CCGCCGCGAT CCTCGTGGCC
TTCGCCCTGT CGTTCTGGCT CAAGCATTCG GACATGGGCC GCGCCATCCG CGCCACGGCG
CAGAACCGGG ATGCGGCGGC CATGTCCGGC ATCAACGTGC CGCTGATCTA CAACGTCACC
TTCGGCCTCG GCTGCGCCGT GCTCGGCCTG TTCGGGGCGC TGCTGGTGCC GTTCTTCTCC
ATCACCCCCA CCATCGGCCT GTCGTTCGGC ATCAAGTCGT TCCTGGTGGT GGTGCTGGGC
GGCATCGGCT CCATCCCCGG TTCGATCCTC GGCGGGCTGC TGCTCGGCGT GTTCGAATCC
GTGGCCGCCC AGTTCGTCAC CGCCACCTCG GCGGCGATCT TCTCCTTCGG CCTGTTCATC
GTGATCCTGC TCATGCGGCC TGCGGGCCTC ATGGGCCGAG CTTGA
 
Protein sequence
MDPLTLSFAV INGLLLGGIY GGVALGLSLI FGVMRVINFA HGSFLMLAMY CSYLLWASLG 
VHPYVSILVT VPFLFAVGYV VQSVVISPLI RRERALVVEP TSALLLTAGV YLVVDNSVLM
AFGPDVRSVT TDITYESIFV AGLPINMARL IGFAAAILVA FALSFWLKHS DMGRAIRATA
QNRDAAAMSG INVPLIYNVT FGLGCAVLGL FGALLVPFFS ITPTIGLSFG IKSFLVVVLG
GIGSIPGSIL GGLLLGVFES VAAQFVTATS AAIFSFGLFI VILLMRPAGL MGRA