| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xaut_0004 |
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| Symbol | |
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| ID | 5421964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthobacter autotrophicus Py2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009720 |
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| Strand | + |
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| Start bp | 4865 |
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| End bp | 6118 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640879249 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001414920 |
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| Protein GI | 154243962 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000538672 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATCCGGC AGATTCTGGG TGGCACACTG GTGCTCGCGG CGGCGGCCGC CATCGGTCTT
GCACCGGCGA AGGCCGATCC GCAGGACGTG ACGGTGGGCT TCGTGCTGCC GCTGTCCGGC
GGTTCGGCCA CCATCGGCAA CCAGACAAAG CTCGGCGCCC AGGTGGCGGC CGAACAGATC
AACGCGGCGG GCGGCATCGC CTCCCTCGGC GGGGCGAAGC TGAAGCTGAT TTTCGCCGAC
AGCCAGTCCA AGCCCGATAT CGGCGCCTCG GAGACCGAGC GGCTGATCCA GCGCGAGAAC
GTCGCCCTGC TGGTGGGCGC CTACAACAGC GCGGTCACCT TCCCGGCCTC GGAAGTGGCC
GAGCGCTACA AAACGCCGTG GATCGTCACC GGCGCGGTGA AGGACGAGAT CACCGAGCGC
GGCTTCAAAT ACGTGTTCCG CCCCAACAAC AAGGCCACCT ACGACGCGCG CGAGCAGCTC
GACGCCATCG ATCTTCTGAA GAAGGAGACC GGCAAGGGTC CCTCAAGCAT CGGCCTGTTC
TACGAAGGCA CCGACTGGGG CCGCTCGCAC GCCGCGAACA TCAAGAAGTT CGCCAAGGAG
CGCGGCTACA CCATCTCCCT CGACGAGAGC TTCCCGCCCA ACCAGGTGGA CTTCACCGCC
CAGATGCTGA AGATCCGCGC GGCGAAGCCC GAGGCGCTCA TCGTGGTGGC CTATACGCCG
GACCACCTGC TGTTCACCCG CCAGTATTTC GAGAACAAGA TCAACATTCC CTACGGCATC
CACTCGGTGG GCGGCGGCTC TGAAGATCCG TCCTTCTACA AGGCGGTGCC GCAGAAGGCC
GTGGACTATC TGTTCGTGCA GGAAGACTGG CAGATCGACC GCCTGAAGAC CGACACCGAC
CCGCGCGTGG TGGATGCAAA CACCCGCTTC AAGGCCCAGG CCGGCTACGA TATCAATTCC
TACGGCGCCC AGGGCATCTC CAACATCTAT CTCATCAAGG ACGTGCTGGA GCGGTCCGCC
TCCGCCGACC GGGAGAAGAT CCGCGACGCG CTCGCCGCCA CCGACATCAC CTCCGGCATG
CCGCTGATCG TCGGCTACCA GCGCATCAAG TTCGATGAGC AGGGCCAGAA CACCTTCGCC
CATGGGGTGA TTTCCGAGAA CATCGGCGGC GAGCGCCGCA CCATCTGGCC CTCCGCCAAC
CGCGCCCCCG ACACCAAGCC GGTTTGGCCG GTGCCGGACT GGTCGGCCCG CTGA
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| Protein sequence | MIRQILGGTL VLAAAAAIGL APAKADPQDV TVGFVLPLSG GSATIGNQTK LGAQVAAEQI
NAAGGIASLG GAKLKLIFAD SQSKPDIGAS ETERLIQREN VALLVGAYNS AVTFPASEVA
ERYKTPWIVT GAVKDEITER GFKYVFRPNN KATYDAREQL DAIDLLKKET GKGPSSIGLF
YEGTDWGRSH AANIKKFAKE RGYTISLDES FPPNQVDFTA QMLKIRAAKP EALIVVAYTP
DHLLFTRQYF ENKINIPYGI HSVGGGSEDP SFYKAVPQKA VDYLFVQEDW QIDRLKTDTD
PRVVDANTRF KAQAGYDINS YGAQGISNIY LIKDVLERSA SADREKIRDA LAATDITSGM
PLIVGYQRIK FDEQGQNTFA HGVISENIGG ERRTIWPSAN RAPDTKPVWP VPDWSAR
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