Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xaut_0003 |
Symbol | recF |
ID | 5422398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthobacter autotrophicus Py2 |
Kingdom | Bacteria |
Replicon accession | NC_009720 |
Strand | + |
Start bp | 3580 |
End bp | 4716 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640879248 |
Product | recombination protein F |
Protein accession | YP_001414919 |
Protein GI | 154243961 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
TIGRFAM ID | [TIGR00611] recF protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.322535 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.000000874576 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCCCACG CCGCCATCCG CAAGCTCACC CTCACGGCCT TCCGATCCTA TCCATCGGCG CAGGTGAGCG TTGAGGACGG GCCGGTGGTG CTCACCGGGC CGAACGGCGC GGGCAAGACC AATATTCTGG AAGCGCTCTC CTTCCTCTCT CCCGGCCGGG GGCTGCGGCG TGCCCAGCTC GGCGAGATCG GCCATCGCGC GCCGGGTGCC GCCGGCGAGC CACCCTGGGC GGTCTCGGCC CTCGTGGAGG GCGCTCTGGG CGAGGTCCGC CTTGGCACGG GCTACGATCC GGTGCAGGAA GGCGGGGTGC GGCGCTGCCG CATCGACGGC GAGCCTGCGC CTTCCGCCAA CGCCTTCCTC GACCATCTGA AAGTGCTCTG GCTGACGCCG GAGATGGATG GCCTGTTCCT GGGGCCGCCC GGCGACCGGC GGCGCTATCT CGACCGCCTC GTGTTGGCGG TGGACGGCGC CCACGGCACA AGGGTCAACG GCCTGGAACG GGCGCTGCGC TCGCGCAACC GGCTTCTGGA GGAGAACGGC TCGGCGCGCT TCCTCGATGC GGTGGAGCAC GAGGTGGCGG AACTCGCCGT GGCGGTGGCG GCGGCGCGGC TGGAGACGGT GGCCCGGCTC GGCGCCGAGA TCGCCGCCCA CCGCGACGAT GCTTCCCTCT TTCCCTTCGC GGAGCTGGCC CTGGATGGGG CGGTGGAGCG GCTCATCGCC GTCCATCCCG CGCTGGAGGT GGAGGACCGT TACCGTGCCC TCCTGCGCGA CAACCGCCCC CGCGACCGGG CGGCGGGCCG CACGCTGGAG GGGCCGCACC TCACCGATCT GTCGGTGAGC CATGGCGAGA AGCAACTGCC CGCCGCGCGC TGCTCCACGG GGGAGCAGAA ATCCCTGCTC ATCGGCCTCA CCTTGTCCCA TGCGCGGCTG GTGGCCTCCA TGCAGGGCTT CTCGCCCATC CTGCTTTTGG ACGACGTGGT GGCCTATCTC GACGCCGCGC GCCGCACCGG CCTGTTCGAG GCCCTGGCCC GCCTCGGCGC GCAGGCCTGG ATGACCGGCG CCGACCCCAC CGCCTTCTCC GCGCTGGACG GCGCCGAGCG CTTCGAGGTG GCGCCGGGGA CGATCGGGCG GGCGTAA
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Protein sequence | MPHAAIRKLT LTAFRSYPSA QVSVEDGPVV LTGPNGAGKT NILEALSFLS PGRGLRRAQL GEIGHRAPGA AGEPPWAVSA LVEGALGEVR LGTGYDPVQE GGVRRCRIDG EPAPSANAFL DHLKVLWLTP EMDGLFLGPP GDRRRYLDRL VLAVDGAHGT RVNGLERALR SRNRLLEENG SARFLDAVEH EVAELAVAVA AARLETVARL GAEIAAHRDD ASLFPFAELA LDGAVERLIA VHPALEVEDR YRALLRDNRP RDRAAGRTLE GPHLTDLSVS HGEKQLPAAR CSTGEQKSLL IGLTLSHARL VASMQGFSPI LLLDDVVAYL DAARRTGLFE ALARLGAQAW MTGADPTAFS ALDGAERFEV APGTIGRA
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