Gene Xaut_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0003 
SymbolrecF 
ID5422398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp3580 
End bp4716 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content73% 
IMG OID640879248 
Productrecombination protein F 
Protein accessionYP_001414919 
Protein GI154243961 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.322535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value8.74576e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCCACG CCGCCATCCG CAAGCTCACC CTCACGGCCT TCCGATCCTA TCCATCGGCG 
CAGGTGAGCG TTGAGGACGG GCCGGTGGTG CTCACCGGGC CGAACGGCGC GGGCAAGACC
AATATTCTGG AAGCGCTCTC CTTCCTCTCT CCCGGCCGGG GGCTGCGGCG TGCCCAGCTC
GGCGAGATCG GCCATCGCGC GCCGGGTGCC GCCGGCGAGC CACCCTGGGC GGTCTCGGCC
CTCGTGGAGG GCGCTCTGGG CGAGGTCCGC CTTGGCACGG GCTACGATCC GGTGCAGGAA
GGCGGGGTGC GGCGCTGCCG CATCGACGGC GAGCCTGCGC CTTCCGCCAA CGCCTTCCTC
GACCATCTGA AAGTGCTCTG GCTGACGCCG GAGATGGATG GCCTGTTCCT GGGGCCGCCC
GGCGACCGGC GGCGCTATCT CGACCGCCTC GTGTTGGCGG TGGACGGCGC CCACGGCACA
AGGGTCAACG GCCTGGAACG GGCGCTGCGC TCGCGCAACC GGCTTCTGGA GGAGAACGGC
TCGGCGCGCT TCCTCGATGC GGTGGAGCAC GAGGTGGCGG AACTCGCCGT GGCGGTGGCG
GCGGCGCGGC TGGAGACGGT GGCCCGGCTC GGCGCCGAGA TCGCCGCCCA CCGCGACGAT
GCTTCCCTCT TTCCCTTCGC GGAGCTGGCC CTGGATGGGG CGGTGGAGCG GCTCATCGCC
GTCCATCCCG CGCTGGAGGT GGAGGACCGT TACCGTGCCC TCCTGCGCGA CAACCGCCCC
CGCGACCGGG CGGCGGGCCG CACGCTGGAG GGGCCGCACC TCACCGATCT GTCGGTGAGC
CATGGCGAGA AGCAACTGCC CGCCGCGCGC TGCTCCACGG GGGAGCAGAA ATCCCTGCTC
ATCGGCCTCA CCTTGTCCCA TGCGCGGCTG GTGGCCTCCA TGCAGGGCTT CTCGCCCATC
CTGCTTTTGG ACGACGTGGT GGCCTATCTC GACGCCGCGC GCCGCACCGG CCTGTTCGAG
GCCCTGGCCC GCCTCGGCGC GCAGGCCTGG ATGACCGGCG CCGACCCCAC CGCCTTCTCC
GCGCTGGACG GCGCCGAGCG CTTCGAGGTG GCGCCGGGGA CGATCGGGCG GGCGTAA
 
Protein sequence
MPHAAIRKLT LTAFRSYPSA QVSVEDGPVV LTGPNGAGKT NILEALSFLS PGRGLRRAQL 
GEIGHRAPGA AGEPPWAVSA LVEGALGEVR LGTGYDPVQE GGVRRCRIDG EPAPSANAFL
DHLKVLWLTP EMDGLFLGPP GDRRRYLDRL VLAVDGAHGT RVNGLERALR SRNRLLEENG
SARFLDAVEH EVAELAVAVA AARLETVARL GAEIAAHRDD ASLFPFAELA LDGAVERLIA
VHPALEVEDR YRALLRDNRP RDRAAGRTLE GPHLTDLSVS HGEKQLPAAR CSTGEQKSLL
IGLTLSHARL VASMQGFSPI LLLDDVVAYL DAARRTGLFE ALARLGAQAW MTGADPTAFS
ALDGAERFEV APGTIGRA