Gene Xaut_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagXaut_0002 
Symbol 
ID5422397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthobacter autotrophicus Py2 
KingdomBacteria 
Replicon accessionNC_009720 
Strand
Start bp2273 
End bp3394 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID640879247 
ProductDNA polymerase III subunit beta 
Protein accessionYP_001414918 
Protein GI154243960 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0861969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.29484e-07 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGGTCA CCGTCGAGCG CGCCGAGCTT CTCAAATCGC TCAGCCACGT CCACCGCGTC 
GTCGAGCGGC GCAACACCAT TCCGATTCTC GCCAACGTGC TGATCAAGGC GGGCAAGAAC
GGGCTGGAAC TGAAAGCCAC CGACCTCGAC CTGGAGGTGG TGGAGAGCGT TCCGGCCGAG
ACCGGCCAGG CCGGGGCCAC CACCGTGCCC GCCCATGTGC TCTACGACAT CGTGCGCAAA
CTGCCCGAGG GTGCGCAGGT GCAACTGGAG GCGGGCGGCG AGCGGGGCAC CCTCACCGTC
AAGGCGTCCC GCGCCCGGTT CTCGCTGCAG ACCCTGCCCG AGGCCGACTT CCCGGACCTC
GCGGCGGGCG AATTCTCCCA TACCTTCAAG GTGAAGGGCG CGGACTTCCG GCGCCTGGTG
GACAAGACCC AGTTCGCCAT CTCCACCGAG GAGACGCGCT ATTACCTGAA CGGCATCTAT
CTCCACGTCA CCGAGGGCGC CGGCGGCAAG TCCATGCTGC GGGCGGTGGC CACCGACGGC
CACCGCCTCG CCCAGGCCGA GCTGGAGGCG CCGGCGGGCG CGGCCGGCCT GCCCGGCGTC
ATCGTGCCGC GCAAGACCGT GGCCGAGATC CAAAAGCTGC TGGAGGACAA GGAGGCGGAG
GCTACCGTCT CGCTCTCCAC CACCAAGATC CGGGTGCAGG TGGGCTCCAT CGTGCTCACC
TCCAAGCTCA TCGACGGCAC CTTCCCTGAT TATGGAAGGG TTATTCCCCA GGGCAACGAC
AAGACCCTGA TCGTGGACAA GGACGAGTTC GCCGCCGCGG TGGACCGCGT CTCCACAGTG
TCCAGCGAGC GCGGGCGGGC GGTGAAGCTG TCGCTGGCCG AGGGCAAGAT GACACTCTCC
GTCACCAATC CCGATTCGGG CAGCGCCACC GAGGAACTGG AGGTGGACTA CACCGCCGAG
CCCCTCGATA TCGGCTTCAA CTCCCGCTAC CTGCTGGACA TCACCTCGCA GCTGGAAGGC
GACACGGCTG AACTGAAGCT GGCCGACCCC GGCTCGCCCA CCCTGGTGCG CGATTCCACC
AAGACGGATG CGCTCTACGT CCTCATGCCC ATGCGGGTGT GA
 
Protein sequence
MKVTVERAEL LKSLSHVHRV VERRNTIPIL ANVLIKAGKN GLELKATDLD LEVVESVPAE 
TGQAGATTVP AHVLYDIVRK LPEGAQVQLE AGGERGTLTV KASRARFSLQ TLPEADFPDL
AAGEFSHTFK VKGADFRRLV DKTQFAISTE ETRYYLNGIY LHVTEGAGGK SMLRAVATDG
HRLAQAELEA PAGAAGLPGV IVPRKTVAEI QKLLEDKEAE ATVSLSTTKI RVQVGSIVLT
SKLIDGTFPD YGRVIPQGND KTLIVDKDEF AAAVDRVSTV SSERGRAVKL SLAEGKMTLS
VTNPDSGSAT EELEVDYTAE PLDIGFNSRY LLDITSQLEG DTAELKLADP GSPTLVRDST
KTDALYVLMP MRV