Gene Plav_3661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3661 
Symbol 
ID5456763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3913947 
End bp3914723 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content62% 
IMG OID640879245 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_001414916 
Protein GI154254092 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.57083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value9.492269999999999e-21 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCTACC AGAACCTTCT GGTCGAAAAG AAAGGCGCGG TCGGCGTCAT AACGCTCAAT 
CGCCCGGACG CGCTCAACGC GCTCAACAAG GCCCTGATGG ATGAAATGAC CTTGGCGCTC
GACGATTACG AAGCGGATGA TGACATCCAC TGCATCGTCA TCACCGGCTC TGCAAAGGCT
TTCGCCGCCG GCGCGGACAT CAAGGAGATG CAGCCGAAAT CCTATATGGA TGTCTACAAG
GAAGACTTCA TCACCGCGAA TTGGGAGCGC GCCACGCGCT GCCGCAAACC GGTCATTGCC
GCCGTCGCGG GTTATGCGCT GGGAGGCGGC TGCGAGCTAG CCATGATGTG CGATTTCATC
ATCGCCGCCG ACACGGCGAA ATTCGGCCAG CCTGAAATCA AGCTCGGTGT CATGCCGGGC
GCCGGCGGCA GCCAGCGTCT TACCCGCTTC GTCGGCAAGT CGAAGGCGAT GGAAATGTGC
CTCACCGGCC GCATGATGGA CGCGGCGGAG GCGGAGCGGT CCGGTCTCGT CAGCCGCGTC
GTGCCCGCGG GCGAGCTTAT GGACGAGGTG CTGAAGGTCG CGCAGACCGT CGCGGACATG
TCGCTTCCCA TCGCCATGAT GACGAAGGAA AGCGTCAACC GCGCTTACGA AACCACCCTT
TCGGAGGGTG TTCGCTTCGA GCGCCGCCTG TTCCATTCCA TGTTCGCGAC CGAGGATCAG
ACCGAGGGCA TGGCGGCCTT TGTCGAAAAG CGGCAGCCCC AGTTCCGTCA CCGCTGA
 
Protein sequence
MAYQNLLVEK KGAVGVITLN RPDALNALNK ALMDEMTLAL DDYEADDDIH CIVITGSAKA 
FAAGADIKEM QPKSYMDVYK EDFITANWER ATRCRKPVIA AVAGYALGGG CELAMMCDFI
IAADTAKFGQ PEIKLGVMPG AGGSQRLTRF VGKSKAMEMC LTGRMMDAAE AERSGLVSRV
VPAGELMDEV LKVAQTVADM SLPIAMMTKE SVNRAYETTL SEGVRFERRL FHSMFATEDQ
TEGMAAFVEK RQPQFRHR