| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3659 |
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| Symbol | |
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| ID | 5456284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 3912563 |
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| End bp | 3913444 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640879243 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_001414914 |
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| Protein GI | 154254090 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 8.713719999999999e-21 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCGGAAC TTCCAGAAGT CGAGACTGTG CGCCGCGGCC TCGCCCCCGC GCTTGAAGGC
CGCCGCATCG TCCATGTGAC GCAGCGCCGC CCCGATCTGC GGTTCCCACT GCCGGAACTT
TTCGCGAAGC GGCTGACAGG ACGCCGCGTG ATCCGCCTGG AGCGCCGCGC GAAATACATT
CTCGTCTATA TGGAACCTGC AAAATCCGGC GGCGCGGAAG ACGTGCTCAT CATGCATCTC
GGCATGTCCG GCCGCTTCAC TGTGCATGGG CCAAGCGGCA GCTCCGCCCC CGGCCTCTTC
CACCTCGGCA TGCCGGGCGG CGAAACCCAT GACCACATCG TTTTCGACAT GGAGGACGGC
ACGCGCGTCG TCTATGCGGA TCATCGCCGC TTCGGCTTCA TGGATCTGGT CGCCGAGCCG
GAACTCGCCT CGAGCCGCCA CCTCGCCGCC CTCGGTCCCG AACCCCTCGG CAATGAATTC
TCAGCCCTCG TCCTCGCCGA AAGGCTGAAG GGCCGCCGCG CACCCATCAA ATCGGCACTG
CTCGATCAGC GGACCGTCGC AGGCCTCGGC AATATCTACG TCTGCGAGGC CCTCTACCGC
GCCGGCATCT CGCCCCTCCG CACCGCCGCC TCCATAGGCC CCGCCCGCGT CGAGCGCCTC
ACCGCCGCCA TTCGCGCCGT CTTGCAGGAC GCGATTGCGG CCGGTGGCTC CACCTTGCGC
GACTATGCGG CGACCGATGG CGAACTCGGC TATTTCCAGC ACGCCTTCGC CGTTTATGGC
CGTGAAGGCG AAGCCTGTTC AAAGCCGGGC TGTGGCGGTA CCGTGAGGCG CATCGTGCAA
TCGGCGCGAT CGACATTCTA TTGCCCCGCC TGCCAGCGAT AG
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| Protein sequence | MPELPEVETV RRGLAPALEG RRIVHVTQRR PDLRFPLPEL FAKRLTGRRV IRLERRAKYI
LVYMEPAKSG GAEDVLIMHL GMSGRFTVHG PSGSSAPGLF HLGMPGGETH DHIVFDMEDG
TRVVYADHRR FGFMDLVAEP ELASSRHLAA LGPEPLGNEF SALVLAERLK GRRAPIKSAL
LDQRTVAGLG NIYVCEALYR AGISPLRTAA SIGPARVERL TAAIRAVLQD AIAAGGSTLR
DYAATDGELG YFQHAFAVYG REGEACSKPG CGGTVRRIVQ SARSTFYCPA CQR
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