Gene Plav_3655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_3655 
Symbol 
ID5455943 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp3908264 
End bp3908731 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content67% 
IMG OID640879239 
Productdeoxyuridine 5'-triphosphate nucleotidohydrolase Dut 
Protein accessionYP_001414910 
Protein GI154254086 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0756] dUTPase 
TIGRFAM ID[TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value7.25645e-20 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATCCTC TTATCGACGT GCGCGTGCAG CGCCTGCCGC ATTCCGACGG ATTGCCGCTG 
CCGCGCTATG AAACATCCGG CGCGGCGGGA ATGGACCTCA TAGCGGCGCT GCCCGAGGGT
GAGCCGATGG TGCTGGCACC GGGCGAGCGC GCGATGGTGC CGACGGGGCT TGCGATTGCG
CTGCCGCAGG GCTTCGAGGC GCAGGTGCGG CCGCGCTCGG GCCTGGCGGC GAAGAACGGC
GTTACGGTTC TCAATTCACC GGGCACTGTC GATTGCGATT ATCGCGGCGA GGTGAAGGTG
ATCCTCATCA ATCACGGGGC CGATGCCTTC ACCATCGAGC GGGGCACGCG CATCGCGCAG
ATGGTGGTGT CGCCGGTGAC ACAAGCACGG TTCGAGGAAG TCGAAACGCT GGACGAGACG
GCGCGCGGGG CGGGCGGTTT CGGATCGACG GGAACGAAGG GGCGATGA
 
Protein sequence
MNPLIDVRVQ RLPHSDGLPL PRYETSGAAG MDLIAALPEG EPMVLAPGER AMVPTGLAIA 
LPQGFEAQVR PRSGLAAKNG VTVLNSPGTV DCDYRGEVKV ILINHGADAF TIERGTRIAQ
MVVSPVTQAR FEEVETLDET ARGAGGFGST GTKGR