| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_3654 |
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| Symbol | |
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| ID | 5455945 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 3907810 |
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| End bp | 3908259 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640879238 |
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| Product | BadM/Rrf2 family transcriptional regulator |
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| Protein accession | YP_001414909 |
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| Protein GI | 154254085 |
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| COG category | [K] Transcription |
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| COG ID | [COG1959] Predicted transcriptional regulator |
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| TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 6.02154e-20 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTGAGGC TCTCCAAAAA AACCTGGCTG GCGCTGGAAG CCGTGGTCGA TGTGGCGATC
AATGCGCGGC CGGACCCTGT GCAATCGAAA GAGATCACCA AGCGGCAGGG CATTCCGCAG
CGCTATCTTG AACAAGTGAT GCAGCAGCTG GTGCATGCGG GCATTCTGAA AGGCGTGCGG
GGCCCGCGCG GCGGCTACAC GCTGGCGCGC GAACGCAGGC GCATTCCGGT GGGAGAAGTG
GTGCGTGTGG TCGGCGCGAT GGAAGCATCG GACGAGCCGA CGGCGACAGC CCCTTCCGAA
CTCGGCGAGC GCGTGATTGC GCCCTTGTGG CAGGAAGTGC AGCGCGAGTT GATGGCGAAG
CTCGACAACA TCACAATAGA AGACATGTGC CGGAAAGCGG AAGAAGTCGG CGTCGGCACC
TCGAAACCGA CCGCCGATTT CATTATCTGA
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| Protein sequence | MLRLSKKTWL ALEAVVDVAI NARPDPVQSK EITKRQGIPQ RYLEQVMQQL VHAGILKGVR
GPRGGYTLAR ERRRIPVGEV VRVVGAMEAS DEPTATAPSE LGERVIAPLW QEVQRELMAK
LDNITIEDMC RKAEEVGVGT SKPTADFII
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