Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3647 |
Symbol | |
ID | 5455677 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3902619 |
End bp | 3903416 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640879231 |
Product | hypothetical protein |
Protein accession | YP_001414902 |
Protein GI | 154254078 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.51576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00000000000126361 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATGCAC CGACGAGAGA GCTGAACCCC GTATTCCGGC GCGATGGCGA GGTGTGGGCC GCGCGGCCGG AAGCGCAAGG CCCCTTTGGC GGCATGCATG GCGGCGCGGT GGCGGCGCTC GCCGTGGGCG AGATGGAAGC GATGGCGGGG CCGCGCGGGC TTGGCGGGCT CGTCTCGGCC AATCTCTATC TGCTGAGGCC GCTGCCGCGC GAGGGGATTT CGAGCAAGGT GAGCGCGGTG CGCGAGGGCG GACGGATTGC CGTGTTCGAG AACGAGCTAT GGGCGGATGG AAAATTGCAG GCAAAGGCGA GTGCCTGCTT CCAGAAGCCT GTGACCATAG ACGGGCTGCC GGGAGCGCCA ACCGAAGTGC TGTTCGAGCC GGAGGGTTTT TCCCGATGGG AGCGGCCGCC GGGCTTCAAC AATTCGGGCA AGGATCACGG CTTTCTCGAT CTGGTCGATA TTCGCGACAC GACACATGAA GACGGAACGC GGGCGAAGTG GTTTCGGCTG AAGCATCCGT TCCACGATGT ACCGACGCCT TTTTCGAATG CGATGGCGGT GGCGGATGTG TCGACGCTTT TCACGGTGAC GGATGCGGGC GCGCGGCCGA GCGCAAGCGG CTGGCCGAAT GCCGATCTTT CCTTTCATCT GTCGCGGGTG CCAATCGACG AATGGATCGG CGTGGCGCAG CGCGGCTCGT GGCATGGCGA CGGACGCGGC ATGACGGAGT CCGAGATTTT CGACGTTCAT GGACGGATCG GGCGGTCATG CCAGAGCGTG GTGCTGCTGC CGCTTTGA
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Protein sequence | MNAPTRELNP VFRRDGEVWA ARPEAQGPFG GMHGGAVAAL AVGEMEAMAG PRGLGGLVSA NLYLLRPLPR EGISSKVSAV REGGRIAVFE NELWADGKLQ AKASACFQKP VTIDGLPGAP TEVLFEPEGF SRWERPPGFN NSGKDHGFLD LVDIRDTTHE DGTRAKWFRL KHPFHDVPTP FSNAMAVADV STLFTVTDAG ARPSASGWPN ADLSFHLSRV PIDEWIGVAQ RGSWHGDGRG MTESEIFDVH GRIGRSCQSV VLLPL
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