Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_3635 |
Symbol | |
ID | 5457042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 3892381 |
End bp | 3893607 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640879219 |
Product | Beta-ketoacyl synthase |
Protein accession | YP_001414890 |
Protein GI | 154254066 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.000487969 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGGCGAG TCGTCGTCAC AGGCATGGGC ATCGTTTCCA GCATCGGAAA CAACACTCAA GAAGTCGTCG GGAGCCTGCG TGAAGGCAAA TCCGGCATCG TGAGAGCCGA TACCTATGCG GAGATGGGGT TCAGGAGCCA GGTGCATGGC AGCCTGAAGA TCAATCTCGA CGAGGCGGTG GACCGGCGCG CGCGGCGCTT CATGGGCGAT GGCGCGGCCT ATGCCTGGAT CGCGATGGAA CAGGCGATCC GCGATGCGGG GCTCGAGGAA AGCGATGTGA GCAACCCGCG CACGGGGCTC ATCGTCGGTT CGGGCGGACC TTCGACCAAG GCGATCGTCG CCGCCGCCGA CATGGCGCGC ACGGAGCCCG TGAAAGGCCC GAAGAAAGTC GGCCCCTTCG CGGTGCCGAA GGCGATGTCC TCGACCTGCT CGGCCAATCT TTCGACCTGG TACAAGACCA AGGGCGTCAA CTACTCCATC AGCTCGGCCT GCTCGACCTC GGCGAACTGC ATCGGCAATG CGGCCGAGAT GATACAGTGG GGCAAGCAGG ACGTGATGTT TGCCGGCGGC GGCGAGGAAC TCGACTGGAC ATTGTCGGTG CTCTTCGACG CGATGGGCGC GATGTCGGCG AAGCGGAACG ACACGCCGGA AAAGGCGAGC CGCGCCTATG ACAAGGACCG CGACGGCTTC GTCATCACCG GCGGCGGCGG CATTCTCGTG CTGGAAGAGC TCGAACACGC GAAGGCGCGC GGCGCGAAGA TCTATGCCGA GATCGTCGGC TATGGCGCGA CGGCGGACGG CGCCGACATG GTGGCCCCTT CCGGCGAAGG CGCGGTGCGC TGCATGAAGA TGGCGCTGCA GAACGTCAAA GAGAAAGTCG ACTACATCAA CCCGCATGCG ACATCGACGC CTGTGGGCGA CATTCCCGAG ATCAACGCGA TCCGCGAAGT CTTCGGCGCC GACATGCCGC CGATCAGCGC CACGAAATCG CTGACCGGCC ACGCACAGGG CGCGGCGGGC GTTCACGAAG CCATCTACAC GCTGCTGATG ATGCAGTCCG GCTTCATAGC GGCGAGCGCC AATATCGACG AGATCGACCC GGCGGTCGCC GACGCCAACA TTGCGCGGAC GCGCATCGAC AATGCCGACA TCAATCTCGC GATCTCGAAC AGTTTCGGTT TCGGCGGCAC CAACGCGACG CTGGCACTGC AACGCTATAA CGGGTGA
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Protein sequence | MRRVVVTGMG IVSSIGNNTQ EVVGSLREGK SGIVRADTYA EMGFRSQVHG SLKINLDEAV DRRARRFMGD GAAYAWIAME QAIRDAGLEE SDVSNPRTGL IVGSGGPSTK AIVAAADMAR TEPVKGPKKV GPFAVPKAMS STCSANLSTW YKTKGVNYSI SSACSTSANC IGNAAEMIQW GKQDVMFAGG GEELDWTLSV LFDAMGAMSA KRNDTPEKAS RAYDKDRDGF VITGGGGILV LEELEHAKAR GAKIYAEIVG YGATADGADM VAPSGEGAVR CMKMALQNVK EKVDYINPHA TSTPVGDIPE INAIREVFGA DMPPISATKS LTGHAQGAAG VHEAIYTLLM MQSGFIAASA NIDEIDPAVA DANIARTRID NADINLAISN SFGFGGTNAT LALQRYNG
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